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sw_6_scaffold_10863_1

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: comp(2..1429)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 463.0
  • Bit_score: 671
  • Evalue 6.60e-190
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036A2154 similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 463.0
  • Bit_score: 673
  • Evalue 2.10e-190
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 463.0
  • Bit_score: 671
  • Evalue 1.30e-190

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Taxonomy

Thioalkalivibrio sulfidiphilus → Thioalkalivibrio → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
CAGCGCCTGCTTCTCCTCGAGCTGGAGGAGGAGATCGGGGCGATCGAGGCGCAGATCGAGTCGCGCACGCTGATGATGTCGACCAACAACATCCTCTCGCCGGCCGATGGCGAGCCCATCATCGTGCCGTCGCAGGACATCGTGCTGGGGCTGTACTACATGTCGCGCGAGGGCGTGAACGCCCGCGGCGAGGGCATGGTCTTCGCCGACGTGGCCGAGGCCCGGCGCGCCTACGAGTCGGGCGTGGCCGGGCTGCACGCGCGCGTGACCGTGCGGGTGCCCGCGACCGAAACCACCGAGTCGGGCGACGCGATCACGCTCATGCGCCGGCGCAACACCACCGTGGGCCGCGCCATGATCTCGGAGATCCTGCCCGAGGGCATGCCCTACGATCTGGTCGAGAAAGACCTCGACAAGAAGGCCGTGTCCGCGCTGATCGACGAGTGCTATCGCAACGTCGGTCTCAAGGAGACCGTGGTCTTCGCCGACCAGCTCATGTATACGGGCTTTCGCTTCGCCTCGGTCAGCGGCATCTCCTTCGGTGCCGAGGACATGGTCGTGCCCCAGGACAAGCAAGAGCTCATCGACGGCGCCGAGAACGAGGTCAAGGAGATCCAGAACCAGTATACGTCGGGTCTGGTGACCTTCGGCGAGCGCTACAACAAGGTCGTCGACATCTGGTCGCACGCCAACGACCGGATCTCGTCGGCGATGATGGACAAGCTCGGCAAGGAGTCGGTCACCGATCGCGAGGGCAGCGAGACCGAGCAGAAGTCGTTCAACTCCATTTTCATGATGGCCGACTCGGGTGCGCGCGGCTCGGCCGCGCAAATCCGCCAGCTCGCGGGCATGCGTGGTCTGATGGCCAAGCCCGATGGCTCCATCATCGAGACGCCCATCACGGCGAATTTCCGGGAGGGGCTGAACGTCCTCCAGTACTTCATCTCGACCCACGGCGCCCGTAAGGGCTTGGCCGACACGGCGCTCAAGACGGCGAACTCGGGCTATCTCACCCGCCGGCTGGTCGATGTCGGCCAGGATCTGGTCGTAACCGAGCGCGACTGCGGCACCGAGCGCGGGGTACACATGAAGCCCATCATCGAGGGCGGCGACGTCGTCGAGGGCTTGCACGAGCGTGTGCTCGGCCGTGTCACGCTCAACGACATCCACGACCCGAACTCGGGCGAGCTGCTGGTTGCAGCCGACACCATGCTCGACGAGCCGACGGTCGACCGCCTCGAGCGCTGCGGTGTCGACGAGCTGTGGGTGCGCTCGGCCATCACGTGCTCGACCCGCTACGGCGTGTGCTCGATGTGCTATGGCCGTGACCTGGCGCGCGGCAACCAGATCAACGTCGGCGAAGCCGTCGGTGTGATCGCGGCGCAGTCGATCGGCGAGCCCGGCACGCAGCTCACCATGCGTACCTTC
PROTEIN sequence
Length: 476
QRLLLLELEEEIGAIEAQIESRTLMMSTNNILSPADGEPIIVPSQDIVLGLYYMSREGVNARGEGMVFADVAEARRAYESGVAGLHARVTVRVPATETTESGDAITLMRRRNTTVGRAMISEILPEGMPYDLVEKDLDKKAVSALIDECYRNVGLKETVVFADQLMYTGFRFASVSGISFGAEDMVVPQDKQELIDGAENEVKEIQNQYTSGLVTFGERYNKVVDIWSHANDRISSAMMDKLGKESVTDREGSETEQKSFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVGQDLVVTERDCGTERGVHMKPIIEGGDVVEGLHERVLGRVTLNDIHDPNSGELLVAADTMLDEPTVDRLERCGVDELWVRSAITCSTRYGVCSMCYGRDLARGNQINVGEAVGVIAAQSIGEPGTQLTMRTF