ggKbase home page

sw_6_scaffold_11567_3

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: comp(540..1370)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 254.0
  • Bit_score: 377
  • Evalue 3.90e-102
RNA polymerase factor sigma-54 n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000369C5C6 similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 269.0
  • Bit_score: 376
  • Evalue 2.40e-101
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Ha similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 254.0
  • Bit_score: 377
  • Evalue 1.90e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorhodospira halochloris → Halorhodospira → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
CCCGGGACCGACCGACGGTTCCGGGTGGACGCCCCCTTCGATCCCGCCGGCGACCAGCCGAAGGCGATCGAGCAGCTCGCCGCCCACGACGTCAACGCGCTGCGGCGCCAGCTCGGCCTCTCACGCGAAGCGCTGCGCGAGGCCATCGAGCTCATCCACTCGCTCGATCCACATCCCGGCTCGCAAATCGCCAACACGACGCCGCAGTACATCGTGCCCGACGTGTTCGTGCGCAAGGAGCGCGGTGTCTGGCGTGTGCGCCTCAACCCCGATGTCGCACCGCGCCTGCGCATCAATCCGCTGTACTCGGGCATGGTCAAGCGCGCCGATCGCAGCGAGGACAACACCTTCCTGCGCGATAACCTCCAAGAGGCGCGTTGGTTCATCAAGAGCCTGCAGAGCCGCAACGAGACCTTGCTCAAGGTGGCCACCGCCATCGTCGAGCACCAGCGCGCCTTCCTCGACTACGGCGAGGAAGCGATGAAGCCTTTGGTGCTGCGTGACATCGCCGACGAGCTCGAGATGCACGAGTCCACGATCTCGCGGGTGACCACCGAGAAATACATGCATACCCCCCGGGGTATCTTCGAATTCAAATACTTCTTCTCCAGCCACGTCGCCACCACCGAAGGCGGCGAATGCTCGGCCACGGCCATTCGTGCCATGGTGAAGAAGCTCATCGATCAAGAAGACCGAGCCAAACCGCTGTCCGATCACAAGATTGCGGGCATACTCGTGGAACGGGGCATCCACGTCGCTCGGCGCACAGTCGCCAAGTACCGTGAGTCGATGGCGATACCGCCATCGAGCGAGCGCAAACGCCTCATATGA
PROTEIN sequence
Length: 277
PGTDRRFRVDAPFDPAGDQPKAIEQLAAHDVNALRRQLGLSREALREAIELIHSLDPHPGSQIANTTPQYIVPDVFVRKERGVWRVRLNPDVAPRLRINPLYSGMVKRADRSEDNTFLRDNLQEARWFIKSLQSRNETLLKVATAIVEHQRAFLDYGEEAMKPLVLRDIADELEMHESTISRVTTEKYMHTPRGIFEFKYFFSSHVATTEGGECSATAIRAMVKKLIDQEDRAKPLSDHKIAGILVERGIHVARRTVAKYRESMAIPPSSERKRLI*