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sw_6_scaffold_12376_3

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: comp(1970..2278)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=2 Tax=sulfur-oxidizing symbionts RepID=G2DER7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 98.0
  • Bit_score: 156
  • Evalue 1.10e-35
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1048808 species="Bacteria; Proteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 98.0
  • Bit_score: 156
  • Evalue 1.50e-35
integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 102.0
  • Bit_score: 153
  • Evalue 2.60e-35

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Taxonomy

endosymbiont of Riftia pachyptila → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGACCAAGTCCCAACTGATTAACGCGCTTGCGCGCAAACAGAGCCATCTGGCCTATCGCGACGTTGAGCTGGCCGTTAAGGGGCTGCTCGAGACGATGAGCCAGGCGCTGTCCAGTGGTGAGCGCATCGAGATTCGGGGCTTCGGGAGCTTTAGTCTGCACTATCGCCCGCCCCGTATGGGCCGTAATCCCAAGTCGGGGGCGGCGGTGGTGTTGCGGGGCAAGTATGTGCCGCACTTTAAGCCGGGCAAGGAACTGCGCGAGCGGGTCAATACGCTGCCGCTCGACCTCGAGAAAGAGGACCAGTGA
PROTEIN sequence
Length: 103
MTKSQLINALARKQSHLAYRDVELAVKGLLETMSQALSSGERIEIRGFGSFSLHYRPPRMGRNPKSGAAVVLRGKYVPHFKPGKELRERVNTLPLDLEKEDQ*