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sw_6_scaffold_12489_4

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: comp(1884..2270)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=511062 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 126.0
  • Bit_score: 102
  • Evalue 5.60e-19
23S rRNA pseudouridylate synthase C n=1 Tax=Oceanimonas smirnovii RepID=UPI00036F768D similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 124.0
  • Bit_score: 105
  • Evalue 3.60e-20
ribosomal large subunit pseudouridine synthase C similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 126.0
  • Bit_score: 102
  • Evalue 1.10e-19

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Taxonomy

Oceanimonas sp. GK1 → Oceanimonas → Aeromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
GCGATTCGCGCGCGCCTGCGCCGCGATCGCCTGGCCTCGGGCGAGCGCATCGTGCGGGTCGATGCGAGCGGGCAGTCGGCGGAATCGGTGTTCCGGCGCCTTCGCGGCGATGGCGGCTTGACCGAGGTCGAAGTCCGCTTGACCACCGGTCGGACGCACCAAATCCGCGTGCATGCGGCGCACATGGGGTATCCGGTTGTGGGCGACCCCAAGTACGGTGCCGCGACAACGGAGAAGCGCTACTTCGGCCAACGGGCGCCGCGGCTATTGCTGCATGCCCATCGCCTGCGGTTCCCGGCGGCCGAGGATACGGTCACCGTCGAGAGCGCCCCGCCGGCCGCGTTCGCCCGAGCGCTGGAGCAGCAGCGAGCCCATGACCACGACTGA
PROTEIN sequence
Length: 129
AIRARLRRDRLASGERIVRVDASGQSAESVFRRLRGDGGLTEVEVRLTTGRTHQIRVHAAHMGYPVVGDPKYGAATTEKRYFGQRAPRLLLHAHRLRFPAAEDTVTVESAPPAAFARALEQQRAHDHD*