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sw_6_scaffold_12644_1

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: comp(3..314)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodosp similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 100.0
  • Bit_score: 102
  • Evalue 4.50e-19
23S rRNA pseudouridine synthase D n=1 Tax=Thioalkalivibrio RepID=UPI00036DB294 similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 101.0
  • Bit_score: 104
  • Evalue 6.50e-20
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 100.0
  • Bit_score: 102
  • Evalue 9.10e-20

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Taxonomy

Thioalkalivibrio sp. K90mix → Thioalkalivibrio → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGGAAGACAGCCAGGAACCCGATATCCGCCGCATCCCGCGCGGACCCGCCGGCCAGCGCCTCGATCGCGCCCTGGCCGATCTGTTCCCCGAGTACTCGCGTACCCGGCTGCAAGACTGGCTCAAAGCCGGGCACTTGCAAGTCGAGGGCATGAGCCCGGCCCCGCGTACTCGGGTCGCCGGCGGTGAATCCGTGCTGCTCGACGCCAGTGTGGCGACGGCGCCCGATCCGACCGTGGATGCGCAGCCCGAGGACGTGGCGTTTCGGGTGGTCCACGCCGATGAGGCGATCCTGGTCGTCGATAAACCGGCG
PROTEIN sequence
Length: 104
MEDSQEPDIRRIPRGPAGQRLDRALADLFPEYSRTRLQDWLKAGHLQVEGMSPAPRTRVAGGESVLLDASVATAPDPTVDAQPEDVAFRVVHADEAILVVDKPA