ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

sw_6_scaffold_12908_5

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: comp(1457..2110)

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 203.0
  • Bit_score: 301
  • Evalue 1.10e-78
endonuclease III n=1 Tax=Arhodomonas aquaeolei RepID=UPI00037FE960 similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 209.0
  • Bit_score: 302
  • Evalue 2.60e-79
endonuclease III similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 203.0
  • Bit_score: 301
  • Evalue 2.10e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Marichromatium purpuratum → Marichromatium → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
GTGAACGACGCTCAATGCGCCCAGATCATGGGCCGGCTCGCCGCCAGCGACCCCGAGCCCACCACCGAGCTGGACTACGCGACCCCGTTCCAACTGCTCATCGCGGTCATCCTGTCGGCGCAGTCCACCGACCGGGGCGTCAATGCGGCGACGGCGAGCCTGTTCGCCGCCGCGCCGACCGCCGAGGCGATGCTGGCGCTCGGTACCGAGGGCGTGCGCGAGCACATCCGCACCCTGGGGTTGTTCAACAACAAGGCCCACAACGTCATCGAGACGTGCCGCCGCTTGGTGGCGCACCACGGCGGCGCGGTGCCGCGTACACGCGCCGAGCTCGAGGCGCTGCCCGGGGTGGGGCGCAAGACGGCCAACGTCATCCTCAACACAGCGTTCGGCGAGCCCACCATCGCGGTCGACACCCACATCTTCCGCGTGGCCAACCGCACGGGCCTGGCGCCCGGTCGAAACGTCCGCGAGGTCGAGCGAGGTCTGGCCCGAGCCATCCCCCCGCGTTATCTGCGCCACGCCCACCACTGGCTCATCCTGCACGGGCGCTACACCTGCACCGCACGCCGACCCCAGTGCGGCCAATGCCCGATCAACGATTTGTGCGAGTACGACGACAAAACGGGAGACACGGCCGATGTTCGGCAATGA
PROTEIN sequence
Length: 218
VNDAQCAQIMGRLAASDPEPTTELDYATPFQLLIAVILSAQSTDRGVNAATASLFAAAPTAEAMLALGTEGVREHIRTLGLFNNKAHNVIETCRRLVAHHGGAVPRTRAELEALPGVGRKTANVILNTAFGEPTIAVDTHIFRVANRTGLAPGRNVREVERGLARAIPPRYLRHAHHWLILHGRYTCTARRPQCGQCPINDLCEYDDKTGDTADVRQ*