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sw_6_scaffold_3346_6

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: 3612..5156

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 518.0
  • Bit_score: 769
  • Evalue 6.60e-220
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 518.0
  • Bit_score: 769
  • Evalue 3.30e-219
DNA-directed RNA polymerase subunit beta n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=RPOB_ALKEH similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 518.0
  • Bit_score: 769
  • Evalue 2.30e-219

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Taxonomy

Alkalilimnicola ehrlichii → Alkalilimnicola → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1545
ATGGCATATTCCTTCACCGAGAAGAAGCGTATCCGTAAGGATTTCGGCAAGCGAACCTCCGTGCTGGAGGCGCCGTATCTGCTGCAAACGCAGTTGGCATCCTACCGCGACTTCTTGCAGGCCGACCAATCGCCGGACGAGCGCGAGCCCGTTGGCCTCCACGCCGCATTCCAGTCCGTACTGCCGATCATCAGTTATTCCGGCAACGTCGAGCTGCAATATGTCAGCTATCGCCTCGGCAAGCCTGCCTTCGACGAGCGCGAGTGCAGCGTCCGCGGCTTGACCTTCTCGGCCCCGTTGCGGGTCCTCGTACGCCTGGTGATCTTCGACAAGGGCACGAGCAACAAGAGCGTCAAGGACGTCAAGGAGCAAGAGGTCTACATGGGCGAGCTGCCGCTCATGACGGACACGGGCACGTTTATCATCAACGGCACCGAGCGCGTGATCGTTTCCCAACTGCATCGCTCGCCCGGTGTCTTCTTCGACCACGACAAGGGCAAGTCGCATTCGTCGGGCAAGCTATTGTTCTCGGCGCGGGTGATCCCGTACCGCGGCTCCTGGCTCGATTTCGAGTTCGACGCCAAGGATTGCATCTATTGCCGTATCGACCGGCGCCGCAAGCTGCCGGCGACCGTGCTGCTGCGTGCGCTCGGCTATGACACCCAGCAGATGCTCGAGATCTTCTTCGACAAGAACCGCTTCCACTTCAGCGGCGATAAGATCGAGCTCGAGCTGCTGCCGCAGCGCCTGCGCGGTGAGACCGCGCAATTCGACATCACCGACGGCAGCAAGGTGATCGTCGAGGCCGGCCGGCGCCACATCAAGGAGCTCGAGAACGCCGGCGTCGAGCGCCTGGCGGTGCCGCGCGAATACCTCGAGGGCAAGATCGTTGCCCACGATATCCCGGATCCGGAGACGGGCGAGCTGCTGGCCTCGGCCAACGACGAGATCACGGCCGATCTGGTGGATCAGATCATCGACAAGGGCATCGCCTCGGTCGACACGCTCTATATCAACGAGCTCGATCGTGGGCCCTATATCTCGAACACGCTCAAGATCGACACGACCAAGACCCAGTTCGAGGCGCAGGTCGAGATCTATCGCATGATGCGCCCGGGCGAGCCGCCGACGAAGGAGGCTACCCAGAGCCTGTTCCAGAATCTGTTCTTCTCCGACGATCGCTACGATCTGTCAGCGGTCGGGCGTATGAAGTTTAATCGCCGCGTGGGCCGCGATAGCCCAGAGGGCCCGGGCGTGCTGTCCAATGAGGACATCCTGGATGTGCTGCGGGTGCTCACCGACATCCGCAACGGCAACGGCCAGGTCGACGACATCGACCACCTGGGCAATCGCCGCATCCGTTGCGTCGGCGAGATGGCGGAGAACGTCTTCCGTGTGGGCCTGGTCCGTGTCGAGCGCGCCGTGCGCGAGCGGCTGTCGATGGTCGAGTCCGAGGGCCTGATGCCGCAGGACATCATCAATGCCAAGCCGGTGGCGGCGGCGATCAAGGAGTTCTTCGGCTCCAACCAGCTCTCGCAGAAGACG
PROTEIN sequence
Length: 515
MAYSFTEKKRIRKDFGKRTSVLEAPYLLQTQLASYRDFLQADQSPDEREPVGLHAAFQSVLPIISYSGNVELQYVSYRLGKPAFDERECSVRGLTFSAPLRVLVRLVIFDKGTSNKSVKDVKEQEVYMGELPLMTDTGTFIINGTERVIVSQLHRSPGVFFDHDKGKSHSSGKLLFSARVIPYRGSWLDFEFDAKDCIYCRIDRRRKLPATVLLRALGYDTQQMLEIFFDKNRFHFSGDKIELELLPQRLRGETAQFDITDGSKVIVEAGRRHIKELENAGVERLAVPREYLEGKIVAHDIPDPETGELLASANDEITADLVDQIIDKGIASVDTLYINELDRGPYISNTLKIDTTKTQFEAQVEIYRMMRPGEPPTKEATQSLFQNLFFSDDRYDLSAVGRMKFNRRVGRDSPEGPGVLSNEDILDVLRVLTDIRNGNGQVDDIDHLGNRRIRCVGEMAENVFRVGLVRVERAVRERLSMVESEGLMPQDIINAKPVAAAIKEFFGSNQLSQKT