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sw_6_scaffold_4548_1

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: 2..271

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus secretin PilQ n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3J2_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 84.0
  • Bit_score: 122
  • Evalue 2.00e-25
type IV pilus secretin PilQ similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 84.0
  • Bit_score: 122
  • Evalue 5.60e-26
Type IV pilus secretin PilQ {ECO:0000313|EMBL:ADE16899.1}; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 84.0
  • Bit_score: 122
  • Evalue 2.80e-25

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Taxonomy

Nitrosococcus halophilus → Nitrosococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
GACCAAGTCGGCCAGGTTTTCAACGGCGTGCCCTCGGGGGACACACAAGAAGTGCAAACGCAAGTATTGGTCGACAACGGCGAGACGGTAGTCCTCGGCGGCATTTACGAAGAGGAGGAGCGCGAGCAGACCGAGCGCGTGCCCTTTTTCGGCGACTTGCCCCTGGTGGGGCGTCTGTTCCGAACCGATCTCAAGACGAACAACAAGAGTGAGCTGTTGATCTTCGTCACCCCCCGAATCGTCGAAGGCGGCACGGGCGTCGAGTATTAG
PROTEIN sequence
Length: 90
DQVGQVFNGVPSGDTQEVQTQVLVDNGETVVLGGIYEEEEREQTERVPFFGDLPLVGRLFRTDLKTNNKSELLIFVTPRIVEGGTGVEY*