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sw_6_scaffold_4777_2

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: comp(2576..3286)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLC7_THISH similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 200.0
  • Bit_score: 178
  • Evalue 1.10e-41
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 200.0
  • Bit_score: 178
  • Evalue 3.00e-42
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACL73482.1}; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkali similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 200.0
  • Bit_score: 178
  • Evalue 1.50e-41

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Taxonomy

Thioalkalivibrio sulfidiphilus → Thioalkalivibrio → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
GTGACAGTAGCGTCGGTCCGGGCCCTGGGCGCCACGCTGGACGAGACTGTGGTCCACAGGCCCCAGCGGGTCGCGTCGCTGACCATCCAGCGCGTTCGCACCGCTTTGGTGGCGGCGGCCGTCACGGCAACCGTCAATGTCGGCCCGTGGGCCGGCGCCCTGGCCGGCGATGGAGTGACCTACAAATACCGCCAGGACGACGGGACCGTCTGGTACACGGACCGGCGCCCCAGCGGGTCCCAGTTCGATGAGTTCGAGTTCATGGGCTATCACGGGCGACCGCCGGCGCGCTCGTCGTGTCGCGGCCTCGGAGAAACCGAGCGCCAACGCCGCATCGCGCGCATCGCGCGGCCCCTCGAGCGGCTGACGCGACGCTTCGACGTCGACCGGCTCCTGATCAAAGCGATGATATCGGTGGAGTCGTGCTTCGATCCGCAGGCCGTCTCGCGCGTCGGCGCGCGTGGCCTCATGCAATTGATGCCCCAGACAGCGCGCGGACTCGGGGTCGACAACGCTTTCGATATCGAGGCGAATCTGCGCGGCGGCATCCAGTATTTCCAGCGCCTGCGCCAGCTCTTCCCCGACCGCCTGCAAGCGGCGCTCGCCGCCTACAACGCCGGCCCCCACGCGGTGCACCGCCACGGTGGCATACCGCCGTATGACGAGACCCAGGACTACGTCCGCCAGGTACTCAGGCAGCTCGCGCAATAA
PROTEIN sequence
Length: 237
VTVASVRALGATLDETVVHRPQRVASLTIQRVRTALVAAAVTATVNVGPWAGALAGDGVTYKYRQDDGTVWYTDRRPSGSQFDEFEFMGYHGRPPARSSCRGLGETERQRRIARIARPLERLTRRFDVDRLLIKAMISVESCFDPQAVSRVGARGLMQLMPQTARGLGVDNAFDIEANLRGGIQYFQRLRQLFPDRLQAALAAYNAGPHAVHRHGGIPPYDETQDYVRQVLRQLAQ*