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sw_6_scaffold_5691_1

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: 2..553

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor AlgU n=1 Tax=Thioalkalivibrio RepID=UPI00037F5721 similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 177.0
  • Bit_score: 233
  • Evalue 2.10e-58
RNA polymerase, sigma-24 subunit, RpoE similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 176.0
  • Bit_score: 231
  • Evalue 2.30e-58
RNA polymerase, sigma-24 subunit, RpoE {ECO:0000313|EMBL:ADN74935.1}; TaxID=550540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Ferrimonadaceae; Ferrimonas.;" source="Ferri similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 176.0
  • Bit_score: 231
  • Evalue 1.10e-57

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Taxonomy

Ferrimonas balearica → Ferrimonas → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
GGCGAGCGCGTCGGGTTCGACCTGCTGGTGGACAAGTACCAGCACCGGGTCGCGCACTTGGTGGCACGCTATGTCCGCGATGCCACCGAGGTCGAGGACGTCACGCAGGAGGTGTTCATCAAGGCGTATCGTGGATTGGCGAATTTCCGGGGCGAGAGCGCGTTCTACACGTGGCTCTACCGGATCGCGGTCAACACGGCCAAGAATCACGCGGTCGCGGCGGGGCGGCGTGCCACCGAGCAAGCGGTCGATGCGCACGAGGCGGAGCAGTATGCGGCCGAGTCGCCACTGCGCGAGGCCGCCACACCCGAGCGCGAGCTCGCCAGCGACCAAATCCAGCAGGCGATCAACGCGACGCTGGAGGGGTTGCCGGCCGAGCTGCGCGATGCGCTGGTGCTACGCGAGATGGACGGGCTGACGTATGAAGAAATCGCGGCGGTGATGGAATGCCCCATCGGCACGGTGCGCTCGCGCATCTTTCGCGCACGCGACGCCATCGATCGCCGGGTCGAGCCCATGCTCGATGAAAACGGGACGCAGACGAATGAGTGA
PROTEIN sequence
Length: 184
GERVGFDLLVDKYQHRVAHLVARYVRDATEVEDVTQEVFIKAYRGLANFRGESAFYTWLYRIAVNTAKNHAVAAGRRATEQAVDAHEAEQYAAESPLREAATPERELASDQIQQAINATLEGLPAELRDALVLREMDGLTYEEIAAVMECPIGTVRSRIFRARDAIDRRVEPMLDENGTQTNE*