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sw_6_scaffold_6478_5

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: comp(2619..3104)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 150.0
  • Bit_score: 172
  • Evalue 4.20e-40
Shikimate dehydrogenase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GUP0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 149.0
  • Bit_score: 171
  • Evalue 5.20e-40
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 149.0
  • Bit_score: 171
  • Evalue 1.40e-40

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Taxonomy

Thiobacillus prosperus → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGGCATCGGCTTGGGACGCGCGCGTCCTCATCCTCGGCGCGGGCGGTGCCGCGCGCGGCGTGGTGGGCCCGCTGCTCGACGCGGGGCCGGCCACGCTAGCGGTCGCCAATCGCACGGAGCGCCGGGCGCATCTGCTCGCAGGCGATTTATGGGACGCCGGCCCGATCCAGGGTCTTTCGCTCGACGAGCTCGCCGACGAGGCCGCCTTCGATATCGTGATCAATGCGACCGCGGCCGGTCTGGGCGGCTCCGCGCCGCCGGTGCCGGCGGATGTGCTCGCCGCGGGCGGGGTCGCCTACGACCTCGTCTATGGCGACAAGGCGGGGCCGTTCCTCGCATGGGCCCGGGAAGCCGGGGCCGGCACCGCTACCGACGGGCTGGGGATGCTCGTCGAACAGGCGGCCGAGTCCTATCGCATCTGGCGCGGCGTCCAGCCCGACACGCGCTCGGTGCTTGCGGCGATGCGCGCCGGTGAAACGCCTTAG
PROTEIN sequence
Length: 162
MASAWDARVLILGAGGAARGVVGPLLDAGPATLAVANRTERRAHLLAGDLWDAGPIQGLSLDELADEAAFDIVINATAAGLGGSAPPVPADVLAAGGVAYDLVYGDKAGPFLAWAREAGAGTATDGLGMLVEQAAESYRIWRGVQPDTRSVLAAMRAGETP*