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sw_6_scaffold_8391_1

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: comp(211..912)

Top 3 Functional Annotations

Value Algorithm Source
racemase n=1 Tax=Pseudomonas mendocina RepID=UPI000379279D similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 230.0
  • Bit_score: 207
  • Evalue 1.60e-50
YggS protein {ECO:0000313|EMBL:KGO99818.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 230.0
  • Bit_score: 209
  • Evalue 4.50e-51
putative alanine racemase similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 230.0
  • Bit_score: 207
  • Evalue 5.90e-51

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Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
TTGTCCGAGGTCGATAGCCAACGCATCCGCGACGGGTTGGCCGCGGTGGAGCGCCGGATCGAAGCGGCTTGCCGAGGCGCCGGGCGCGATCCGGCCTCGGTACAGCTTTTGCCTGTGACCAAAACATTGCCGCCCGCGGCGCTGCGTGTCGCCGTCGACGCGGGGTATCGGGCGTTGGGCGAGAACCGGGTGCAGGAGGCCAGCGACAAGGCCGACGCCCTGACATCGACCGGTATCGAGTGGCACATGATCGGCCACCTGCAGCGCAACAAGGTCAAGCAGGCGTTGGCATTCGCCCACTGTATCCAAAGTGTGGATCGCCAGGCGCTGGCGCAGCGCCTGGCCGACCAGCTCGCTAACACGGGTGAGTGTTGTCGCGTATTGATCCAAGTCAACACCTCGGGCGCGCCCAGTCAGTACGGCGTCGCCCCCGAACGCGCCGGCGAGCTGGCGCGCTACGTCGCCGCTCGGGGCGAGCTCGAGCTGACCGGTTTGATGACGATCGGGCGCCTGGTCGACGCGCCCGAGGACGCGCGCGACTGCTTCCGCACACTGCGCGAGCTGCGCGATCGCCTCGCCGACGAGCTCGGTCAGGCACTGCCCGAGCTCTCGATGGGGATGTCGGGCGACATGGAGGTGGCCATCGACGAGGGCGCGACCCTGGTGCGCGCCGGCAGTGCGATCTTCGGCGCTCGTAGCTGA
PROTEIN sequence
Length: 234
LSEVDSQRIRDGLAAVERRIEAACRGAGRDPASVQLLPVTKTLPPAALRVAVDAGYRALGENRVQEASDKADALTSTGIEWHMIGHLQRNKVKQALAFAHCIQSVDRQALAQRLADQLANTGECCRVLIQVNTSGAPSQYGVAPERAGELARYVAARGELELTGLMTIGRLVDAPEDARDCFRTLRELRDRLADELGQALPELSMGMSGDMEVAIDEGATLVRAGSAIFGARS*