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sw_6_scaffold_1054_5

Organism: SW_6_Viridiplantae_55_9

partial RP 24 / 55 MC: 5 BSCG 12 / 51 ASCG 7 / 38 MC: 2
Location: 5739..8939

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=88036 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopo similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 858.0
  • Bit_score: 893
  • Evalue 2.40e-256
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 431.0
  • Bit_score: 210
  • Evalue 3.20e-51
DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SYZ7_SELML similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 858.0
  • Bit_score: 893
  • Evalue 1.70e-256

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Taxonomy

Selaginella moellendorffii → Selaginella → Selaginellales → Lycopodiidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 3201
ATGATGGTGACCGCCGGCTCAAAGGGTTCGTACATCAACGTCAATCAGGTGATTGCGTGTGTGGGCCAGCAAAGTATCGAGGGCAAACGCATCGGTTTTGGCTTCGAAGATCGCACTTTGCCACACTTCACCAAAAACGATTACGGCCCGTCTTGCAGAGGCTTTGTCCAGAACTCATACCTGCGGGGCCTTGCTCCAACAGAGATGTATTTCCACGCGATGGGTGGTCGCGAAGGCTTAATTGACACAGCTGTGAAGACAGCAGAGACTGGATACATTCAGCGTCGGCTTGTGAAGGCATTGGAAGACTTGGCTGTCCAGTATGATGGAACTGTACGAAACAGTGTCGGTGAGGTTGTGCAGTTCCTCTATGGAGAGGACGGGATGTCTGGTGAGCGGATCGAAGCTCAGCACCTCGACAGCCTTCGCCTGTCCGATGACGATTTCCAACGACGCTTCTACCTGGACACCAGGAGCTTTGAGGATCTTGTGCGGAGCCTTGGCAGCACTGAGGTTGCTGAACGAGTGATGAATAGGCCCGAGGATCTATACGTGCTTGCGCAAGAGTACAGCCAGCTCCAGGCTGACAGAGAGACACTGCGAACGCTCGTGCCCGGCCCATCGAACGGACAGCCGGAGGTAAATCTCCCAGTCAACATGACGCGGATACTACACAACGCTCTTAAGAAGTTCCGTGACGCGGGAAGGCAAAAAGGCGAGCTGAATCCTGTCGAAGTATGCCGAAAAGTTGAGAATTTGCTCGACAACCTCAAGTCGGCGGTGGTTCCTGGCAAAGGATCTATTTCGAAGGAGGCACAAGAGAACGCCACGATGCTCTTTTGCATTTTGGTCCGCTCGACGCTAGCATCAAAGCGAGTCATCTCCGAGTACATGCTCACTCAAGAGGCATTCGACTGGATGCTCGGCGAGATTGAAACGCGCTTCAAGCAGTCGCTTGCGACACCGGGCGACGCAATTGGTTGCGTGGCTGCGCAATCGATCGGAGAGCCAGCGACGCAAATGACGCTCAATACTTTCCATTTCGCTGGTGTGTCAGAGAAGGATGTAACACAAGGCGTGCCGCGATTGAAGGAGGTCATCAACATTGCTAAGAACATTCAGACGCCAAGCTTAGAAGTATATCTTCGTGACGTATGGGAGTGTGATAAGGATAGAGCGAAAGATGTGCAAGCGGAGGTGGAGTACACGACATTGCAAAGCGTCACTGAGCGCACAGAGATCTACTATGACCCAGATCCAAGAAATACCGTGGTTGAGGAGGACAGAACTTTTGTGCAGACATACTTTGACGTGCCAGACGAAGACGTCGATCCGGACAAGCTCTCGCCATGGCTTATTCGCATTGTGTTAAATAGAGAGATGATGGTTGACAAGCAGCTGTCCACTGAAGAAGTTGCGGACCGTGTGAACGAGGAGTTTAAGGATATGGTGAAGTGCATATGCACGAACGACAACGCGGAGACTCTAGTATTGCACGTAAGAATGCTTAAAAACGAGCAGGACCAGCAGATGGAAAAGCAGGAGGATGATGACGAAGAGGAGGAGGACCCTGGAGAAGCCGATGTGAGAATGCAGCGCCTCGTGGAGAGCAGACTTCTGACTGATGTCAAGCTTCGAGGGATTCGAAGTATCAAGAAAGTATACATCCGGGAGCAAACTCGGCATGAGATTGATTCTCGCACCGGAGCGTACAGGGAGACAAAGAAGTACTTGCTGGACACGGATGGCTCTAATTTGAAGAATGTGATGTGCAAGCCACAAGTTGACGAAACGCGAACATACACAAACCATTTGGTGGAGCTCTTCCAAGTGTTGGGCATCGAGGCTGCTCGAAGCGCGTTGATGTATGAGCTTCGCGGCGTGATACAGACAGGTGGCTCGTATGTTAATTATCGACACTTGGCGATCCTGTGTGAGGTCATGACCGCAAAAGGCCACTTGCTTTCCATTACTCGCCATGGATTCAACCGCACAGACACTGGACCGCTTATGCGTTGCACATTTGAGGAGTCGGTCGACATTCTGATGCGAGCAGCTGCTTTCAGTGAAAAGGATAGCATGAAGGGCGTGAGTGAGAACATCATCATGGGACAGCCGACGCATATGGGCACCGGAGCATTCAGATTGAAACTTGACATGGGTATGCTGAACCAGGCGATCCCACTGGATGAGGAGGCAATAATGACAACGTACGGCGGCGAAGCATCAGGCGCTAGCTGTAAGACTCCAGGCGCAGGGGTAATGAGTCCACAGCTCTCACCGCAGGCATCACCCTTCGAGGGTGGTGCATCCTTCTCACCGTTGACTGGATCTGGCGCATATTCGCCCACTAGTCCTGCAGTGAATCCGCCTGGTAGTTCTGGCCCAAGTCCAACAAGTCCAAGCAGCCCGCAATCCCCAAATTACAGCCCGCAGTCTCCAAGCTACAGCCCGCAATCACCGGCATACAGCCCATCATCGTGCGTTTGGTCCAAGCGTTATCTGCCTGTCTCTGGGTCTTCAACCATATCATACACTTTCTGCTCACTTCTGCAGACCCGCATATTCCCCAACATCGCCAGCGTACTCACCAACCTCGCCCGCCTACTCGCCAACATCTCCTGCCTATTCACCAACGTCGCCAGCGTACTCACCGACGTCACCCGCATATTCGCCCACCTCGTGCGCTCTTCCCTTTTCACTGATCGCGGTTCCAGCGCTCTTGCTGAATCTGTGCTGCGATTCGTGACTGCGCAGGCCAAACTACAGCCCAGCTTCACCGAATTACTCCCCCACATCACCTGCTCGAGGCGGCGGGCACTACTCCCCTACCTCGTACGCATTGCGTCGTGGTGCTTATGTGCCTTCCGCCGGGCAGGAGATGCGTTGGACTCACACTGCTTTTTGTGTGCTCTGTTTTGCGCTCTTGCTGCTGTTTCTCGTACAAACAGGCCTCAGTACAGGTGCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGTGGGCATTATTCACCGACAAGCCCACAATACTCGCCAACATCACCGCAGAAGCAGCAACAGCAGTCACCGACGTCACCGGCATTTTCTCCGAACCGCGACCAGAACGGTGGATCGGGAAATGGATGAGGAGAGAAGAGACGTCGAGGTTGCAAATCAGTTGTACTCAGGTAAGTCGATGA
PROTEIN sequence
Length: 1067
MMVTAGSKGSYINVNQVIACVGQQSIEGKRIGFGFEDRTLPHFTKNDYGPSCRGFVQNSYLRGLAPTEMYFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDLAVQYDGTVRNSVGEVVQFLYGEDGMSGERIEAQHLDSLRLSDDDFQRRFYLDTRSFEDLVRSLGSTEVAERVMNRPEDLYVLAQEYSQLQADRETLRTLVPGPSNGQPEVNLPVNMTRILHNALKKFRDAGRQKGELNPVEVCRKVENLLDNLKSAVVPGKGSISKEAQENATMLFCILVRSTLASKRVISEYMLTQEAFDWMLGEIETRFKQSLATPGDAIGCVAAQSIGEPATQMTLNTFHFAGVSEKDVTQGVPRLKEVINIAKNIQTPSLEVYLRDVWECDKDRAKDVQAEVEYTTLQSVTERTEIYYDPDPRNTVVEEDRTFVQTYFDVPDEDVDPDKLSPWLIRIVLNREMMVDKQLSTEEVADRVNEEFKDMVKCICTNDNAETLVLHVRMLKNEQDQQMEKQEDDDEEEEDPGEADVRMQRLVESRLLTDVKLRGIRSIKKVYIREQTRHEIDSRTGAYRETKKYLLDTDGSNLKNVMCKPQVDETRTYTNHLVELFQVLGIEAARSALMYELRGVIQTGGSYVNYRHLAILCEVMTAKGHLLSITRHGFNRTDTGPLMRCTFEESVDILMRAAAFSEKDSMKGVSENIIMGQPTHMGTGAFRLKLDMGMLNQAIPLDEEAIMTTYGGEASGASCKTPGAGVMSPQLSPQASPFEGGASFSPLTGSGAYSPTSPAVNPPGSSGPSPTSPSSPQSPNYSPQSPSYSPQSPAYSPSSCVWSKRYLPVSGSSTISYTFCSLLQTRIFPNIASVLTNLARLLANISCLFTNVASVLTDVTRIFAHLVRSSLFTDRGSSALAESVLRFVTAQAKLQPSFTELLPHITCSRRRALLPYLVRIASWCLCAFRRAGDALDSHCFLCALFCALAAVSRTNRPQYRCLXXXXXXXXXXXXXXXXRWALFTDKPTILANITAEAATAVTDVTGIFSEPRPERWIGKWMRREETSRLQISCTQVSR*