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sw_6_scaffold_1461_10

Organism: SW_6_Viridiplantae_55_9

partial RP 24 / 55 MC: 5 BSCG 12 / 51 ASCG 7 / 38 MC: 2
Location: 5387..6370

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; Flags: Fragment;; TaxID=3067 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamy similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 328.0
  • Bit_score: 212
  • Evalue 1.30e-51
RluA family pseudouridine synthase (EC:3.2.1.17) similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 299.0
  • Bit_score: 135
  • Evalue 2.30e-29
RNA pseudouridine synthase mitochondrial (Fragment) n=1 Tax=Volvox carteri RepID=D8U860_VOLCA similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 328.0
  • Bit_score: 212
  • Evalue 9.10e-52

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Taxonomy

Volvox carteri → Volvox → Chlamydomonadales → Chlorophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 984
ATGCACATCCTCTTTGAAGATCCGCACATCCTCGTCCTTCACAAGCCAGCTCACATGGTCACCCATCCAGCCCCTGGCAACCCTTCCAACACACTCGTTAACTCCGCCCTCGCTGTCGCCGAGCTCGCGCCTAGCATTGGCTCTGATAACAGCAGTGCTAATCCCTCCAATCCAGCCGCTGATTATCACAGCAGCAGCAGCAGTACAAACAGCGTTGATACCGCTGACGTCTCAAGGCCAGATGTCACTCGCCCTGGCATCGTGCACCGCCTTGACAAGGGCACATCTGGTGTAATTGTGCTTGCAAAGAGCGAGATAGCGCTCTCCTCGCTAGCTGCGCAGTTCAAAGAGCACTCGGTTCGGCGTTGGTACATTGCCATCTCCTGCGGAAGACTGCGACAGACGGAGCGCGGTTTCGTCGAGCAGCCCATCATGCGCGACCCGAGAGATAGGACGCGAATGACGGCGCTTGACGTCTCGCCAAGCACAATGTACAAGGATGAGGGTCTGGAGCTCGCAGCGCTCGATGACAGTCAGCTCCCGCAGGGTGCCAGAAGTGCAATCAGCTGGTATACGCCGCTAGCCTGGTTACAAAGGCAGCCTGCTGAAAGAAGAAATGACAGCGGCTCTGCTGCGGGGGCGGGCGTGACGCTGATGCGGTGGCAGCTTGGAACTGGGCGGACGCACCAGGTGAGAGTGCATGCGAAGCACCTTGGACATCCCCTACTGGGCGATGTAGAATACGGCGGTGCTAGGAAGCGGGCAGTGAACGATGTTAGGGCATGCGGGTTGCAGAAGAGGCGGGCAGAGGCGCTGCTTGAGCGACTAGGTAGGCCGGCGCTGCATGCGTCGCTTTTGGAGTTTGCGCATCCAGTGACACAGAGGCGAATGCGGTTCAAGCAGCAGCCACCGGAGGACTTCATGGAAGTGCTAGAGCGGCTCGGAGCCGGGGAGAATGAGTTGGAAGCTGCGCGGGACGAGTGA
PROTEIN sequence
Length: 328
MHILFEDPHILVLHKPAHMVTHPAPGNPSNTLVNSALAVAELAPSIGSDNSSANPSNPAADYHSSSSSTNSVDTADVSRPDVTRPGIVHRLDKGTSGVIVLAKSEIALSSLAAQFKEHSVRRWYIAISCGRLRQTERGFVEQPIMRDPRDRTRMTALDVSPSTMYKDEGLELAALDDSQLPQGARSAISWYTPLAWLQRQPAERRNDSGSAAGAGVTLMRWQLGTGRTHQVRVHAKHLGHPLLGDVEYGGARKRAVNDVRACGLQKRRAEALLERLGRPALHASLLEFAHPVTQRRMRFKQQPPEDFMEVLERLGAGENELEAARDE*