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sw_6_scaffold_15915_1

Organism: SW_6_Viridiplantae_55_9

partial RP 24 / 55 MC: 5 BSCG 12 / 51 ASCG 7 / 38 MC: 2
Location: comp(350..754)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Chlorella variabilis RepID=E1ZLC0_CHLVA similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 134.0
  • Bit_score: 165
  • Evalue 5.30e-38
Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic {ECO:0000313|EMBL:KFM25400.1}; TaxID=3075 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 133.0
  • Bit_score: 173
  • Evalue 2.70e-40
mRNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 127.0
  • Bit_score: 161
  • Evalue 1.60e-37

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Taxonomy

Auxenochlorella protothecoides → Auxenochlorella → Chlorellales → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 405
GTGAAGGACCTTGCCTGTGCATTCCGCGCCAGCATGAGCAATCCCAACGCGATCAACCAGGTGTACAACATCACAGGTGAGCGCTATGTCACCTTTGATGGCCTTGTGCGTGCCTGTGCACAAGCAATGGGTAAGCCTGAGCCCGAGATCGTGCATTACGACCCGAAAGCCGTTGATCTTGGTAAGAGCAAGGCCTTCCCGCTTCGAAATCAGCACTTCTTTGCTAGCATTGACAAGGCGAAGGCTCAGCTCAACTGGGAACCTGCATTCGACCTCGTCGCTGGTCTTGCTGAATCGTACCAGAAGGACTTCAAGGAGCAGGGCAAGGACCAGCGCTCGCCTGACTTCAGCGTTGATGATGTCATCCTCGATGCAGTCAAAGCCCCAGCAGCCGCCGCTGCTTAA
PROTEIN sequence
Length: 135
VKDLACAFRASMSNPNAINQVYNITGERYVTFDGLVRACAQAMGKPEPEIVHYDPKAVDLGKSKAFPLRNQHFFASIDKAKAQLNWEPAFDLVAGLAESYQKDFKEQGKDQRSPDFSVDDVILDAVKAPAAAAA*