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sw_6_scaffold_2408_2

Organism: SW_6_Viridiplantae_55_9

partial RP 24 / 55 MC: 5 BSCG 12 / 51 ASCG 7 / 38 MC: 2
Location: comp(3532..5373)

Top 3 Functional Annotations

Value Algorithm Source
TPR-like protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0YYY9_9CHLO similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 237.0
  • Bit_score: 141
  • Evalue 2.80e-30
TPR-like protein {ECO:0000313|EMBL:EIE23608.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-169.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 237.0
  • Bit_score: 141
  • Evalue 4.00e-30
tetratricopeptide repeat domain containing protein similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 225.0
  • Bit_score: 138
  • Evalue 9.80e-30

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Taxonomy

Coccomyxa subellipsoidea → Coccomyxa → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1842
ATGGAGGAACACGTCACTAGCTGGCAGCATCTTGAGGGCCGCAATGCAAGCGTTGCGTGTTTGAGAAGAAAGAGCGTGCCTGCTCCTGCTGCGCACGGAGGGCAACGCCGCGGCGATGGGCAAGGCCAACAGCAACGACCGCCCCGCAGGCTCCCTCTCCGCCGTTCCTGTTGTGCGCCGCGCGCCTGCATCGCCTGCGTCCGAATGGAAGGGAGGGCGGAGGCACTGCTGCTCCACGGTCAGGCGTCCGACGCCGCTGCATTTGCACAAGTTGATGGTGACGTCTGGCTTGCAGCGCGCGCGCTCCTCCTCGCGGGCCAGCCCCTGCGCGCGCATGCCCAGCTCGCGCCTGAAGACAGCGAGGATGCCCGAGCGTTCAAAGCCCGCTGCCTCTGTGACACGGGCCTGGGCGAGCGCGCCCTCGCTGAGCTTGGTGAGGCGCCCTCTGACCGTGCCGACGAGCCTGCTAGCACCTGTACCCTTCGCGGCCGGGCGCTCGAAGAGCTCGGCTGCAAGCAACAAGCCTCCATCTTTCACGAACGCGCACTCCTGCTTGACAACTTGCAACTCGACTCGCTCTCTGCCGCCTGCAGCCGGAAGCTCATCAGCTCATATCGCCTTCACAGCCTCCTCTCAAATCATCTCGCCCGTGCACTCGCCGGCCTTGGCGTTGAACCCTCCCTCATAGGCACCAACGCACGCAGATGCGCTCCTGTGCGTTCTGCCGAGGCCAGCCGCTTCCTCAATCTTGGCGACCCAGAAAGTGCACTTGACGAGGTTCGTGGTCTTGAACTCGAGCCCGGCGCTGGCTGCGCTGAGGCGCTTACTGCGCTCGCATCGCTCTCGCGCTCGCATGAGCTGCTCCGCATTACGCACAACTTATCCACTTCCTCGACTTTTGCTCCTTCTTCCGTATCCAGCCCACCCTCAGGCGCAACAACCTCTGCCTCTGCCGCAGCCGCTGCAGCTGCAGCTGCTTCCGCAACCTCGTGTCGCCAGCAGCAACAGCACCAGCACATGTCGCAGATGCAAGCTGCCGCGACACCTGTGCCGGCTTCATGCACGTCCACCTCTGCACCTATTGCCTGCTTGCCCGCTTACGCCGCTGGATGCCAGCACTTTGCCGCGAGACAGCTCGATGCGGCTCGGCGCTGGTTTAGCCGTGCATGCTCTCGTGCGTTCCCGCCAGCATGGCTTGGCTTTGCGCACGCGCTTGCTGAGCAGGAGGAGCACGACCAGGCGCTCGCGGCCTACAGAGCTGCTATGCGTGCCTTTCCGGAGTGGCATGCGCCACGAATGTTCCTTGGCACGGAACACCTAGCGCAATCTGGCGCTCAAGCTGCGCTCCATTTCTTGAGGCAAGCTAAGGACCGTGCTCCTCAGGACTGGCAGGTACACGCAGAGCTGGGCGCAGCGTACTATGCAGCCGGACAGCAGGATGAGTATGCCGAGTATTGTATACGTGAAGCGCTGAGTCGCCTGCCGAATGGAACGATGGCCATGCAGTATGAGGAGGTGCTGCGAGCTAACCTTGGACATGTGTTGAGGCGGCAAGGAAAAATCTCTGATGCGGTGGGCGAACTTCAGAGAGCCACTTGCACTGGCGATGGCAGGAAGGCACCAGGCACGCATACTGCAATGGGGCTTTGCTACATTCAGCTCGGGATGTGTACTAGAGCTGTTGAAGCGCTTCATACCAGCTTGTCTTTGAAGCCAAATGACAGCGTTGCGTCCGAGCTGCTTGAGGCAGCGCTCTCCCGAACCTGCCGCGCCGAAGAAAGCCGGGCTGAGGCAGTGCTACGAGAATCCAAAGAATCTCCTCAAAGATATTCAAGCCAATGA
PROTEIN sequence
Length: 614
MEEHVTSWQHLEGRNASVACLRRKSVPAPAAHGGQRRGDGQGQQQRPPRRLPLRRSCCAPRACIACVRMEGRAEALLLHGQASDAAAFAQVDGDVWLAARALLLAGQPLRAHAQLAPEDSEDARAFKARCLCDTGLGERALAELGEAPSDRADEPASTCTLRGRALEELGCKQQASIFHERALLLDNLQLDSLSAACSRKLISSYRLHSLLSNHLARALAGLGVEPSLIGTNARRCAPVRSAEASRFLNLGDPESALDEVRGLELEPGAGCAEALTALASLSRSHELLRITHNLSTSSTFAPSSVSSPPSGATTSASAAAAAAAAASATSCRQQQQHQHMSQMQAAATPVPASCTSTSAPIACLPAYAAGCQHFAARQLDAARRWFSRACSRAFPPAWLGFAHALAEQEEHDQALAAYRAAMRAFPEWHAPRMFLGTEHLAQSGAQAALHFLRQAKDRAPQDWQVHAELGAAYYAAGQQDEYAEYCIREALSRLPNGTMAMQYEEVLRANLGHVLRRQGKISDAVGELQRATCTGDGRKAPGTHTAMGLCYIQLGMCTRAVEALHTSLSLKPNDSVASELLEAALSRTCRAEESRAEAVLRESKESPQRYSSQ*