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sw_6_scaffold_2837_5

Organism: SW_6_Viridiplantae_55_9

partial RP 24 / 55 MC: 5 BSCG 12 / 51 ASCG 7 / 38 MC: 2
Location: comp(2598..3779)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Capsella rubella RepID=R0GU49_9BRAS similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 318.0
  • Bit_score: 221
  • Evalue 1.80e-54
Uncharacterized protein {ECO:0000313|EMBL:EOA14703.1}; TaxID=81985 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; similarity UNIPROT
DB: UniProtKB
  • Identity: 37.4
  • Coverage: 318.0
  • Bit_score: 221
  • Evalue 2.50e-54
RPA70C; replication factor-A protein 1-like protein; K07466 replication factor A1 similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 335.0
  • Bit_score: 211
  • Evalue 4.50e-52

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Taxonomy

Capsella rubella → Capsella → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1182
CCCCAACAGCAGCCGCACGCTCCGCCACACGCGCAACCTGCCGGCGGGTATGGCACAGGCGGCGCTCATCCGATCTCACCCAAGCATGCTTACGGCAACGCCTACTCCGGCGTGACCTCCTACGGCCAGGACAGGCAGCAGCCGTCCCACGCCGGGATGGATCAAGGCCCCACGCGGCAGTTCTACCAAGCGCAAGGTGGCCCCACTGCGAAGAACCAAGCGCCTCCTCAGATTACACCTGTGAAGATGCTCAACCCGTACCAAGGGCGTTGGACAATTGAGGTTCGCGTGACGGCTGTTGGGAGCATCAAGACATTCTCAAAGCAGGGCTCCACCGGCAGAGTGCAGAATTACGACGTCGTCGACGCGCACAAGGATGAGATCCGCTGCGTTGCGTTCAACGAAACCATTGACCATTTCAGCAGCCTGTTCGAAAAAGGCAAAACGCTTCGGATATCAAAAGGCTCGCTTGTTCAGGCGAACCCGAAGTTCAACAACCTCAACACTGACTACGAGATCCGGCTGGACAAGAATTCAGTTGTTGAGGAGATGTCAGATCAAGGCAGCATCCCGAGCATGTCCTTCAACTTCAGAAGTATCGCCGACCTTGAGCACACAGAGGTGGGCGTTACCATCGACATCATCGGCATCGCCACGTCAGCGCGCGATGCGGCTGACATCGTCCGTAAGGATGGCAGCCAGACGAGAAAGCGCGATGTCACACTGGTTGATAACTCTGGCAGCGGTATTGATTGTACGCTCTGGGACCGTTTCGCTGACAATGAGGGGGGTCAGATACAAGAGCGACTTAACACCGAAGCCAAGAAACCGATAGTTGCGATCAAGGCATGCCGTGTTGGCTCCTTTGGTGGAACCTCGCTCAACAGCAGCGCCAACTCAGTCATCGTTATCAATCCCGACCTTCAGGCGCGCTCGTCTTTTAGAATACACTCAGTCTCTTCTGTGCGCCGGAAATTACTGCATTTCCTCACTTCATCTATGTGCTTGCTCTCTGCTTTTCCGCTGAGCAGGAGGCGAAGCAGCTGGCATCACTGCAAGATGCTGAAGACACAGGAGCACGGATGCTTACTGGGACCGGCGGCGGTGGTGGTAGCACAAAGCGCACTGTGTCGATTGAGCAGCTCCGTCGCGAAACCAGCGAGAAGAGTAATATGCCAATAA
PROTEIN sequence
Length: 394
PQQQPHAPPHAQPAGGYGTGGAHPISPKHAYGNAYSGVTSYGQDRQQPSHAGMDQGPTRQFYQAQGGPTAKNQAPPQITPVKMLNPYQGRWTIEVRVTAVGSIKTFSKQGSTGRVQNYDVVDAHKDEIRCVAFNETIDHFSSLFEKGKTLRISKGSLVQANPKFNNLNTDYEIRLDKNSVVEEMSDQGSIPSMSFNFRSIADLEHTEVGVTIDIIGIATSARDAADIVRKDGSQTRKRDVTLVDNSGSGIDCTLWDRFADNEGGQIQERLNTEAKKPIVAIKACRVGSFGGTSLNSSANSVIVINPDLQARSSFRIHSVSSVRRKLLHFLTSSMCLLSAFPLSRRRSSWHHCKMLKTQEHGCLLGPAAVVVAQSALCRLSSSVAKPARRVICQ*