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sw_6_scaffold_3014_1

Organism: SW_6_Viridiplantae_55_9

partial RP 24 / 55 MC: 5 BSCG 12 / 51 ASCG 7 / 38 MC: 2
Location: 633..1292

Top 3 Functional Annotations

Value Algorithm Source
Probable rhamnose biosynthetic enzyme 3 n=2 Tax=Arabidopsis thaliana RepID=RHM3_ARATH similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 171.0
  • Bit_score: 208
  • Evalue 6.70e-51
Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 {ECO:0000305|PubMed:17190829}; Probable rhamnose biosynthetic enzyme 3; Short= similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 171.0
  • Bit_score: 209
  • Evalue 5.50e-51
MUM4 (mucilage-modified 4) similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 171.0
  • Bit_score: 144
  • Evalue 2.60e-32

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Taxonomy

Arabidopsis thaliana → Arabidopsis → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 660
TTGGACCGCCTGGACTACTGCAGCAGCAGGAAGTCGCTGCGTTTCGCGCTCTCAAAGCCAAACTTCAAGCTCGTTGTGGGCTGCGTCACACAGCGTGACCTCGTGAACTTCCTCATGTGCAACGAGCAAGTTGACACTGTGCTCCACCTGGCCGCTCAGACACATGTGGACACCTCCTTCGGCTCTTCGTTCTCCTACACCCAGAGCAACGTCTACGGCACCCATGTCATGCTTGAGTGCGCTCGTGCCTGCGGTACTGTCCGCCGCTTCCTTCACGTCAGCACCGACGAGGTCTACGGCGAGTCAGGTGTCACTACATCCGGCGCTTCGATCGCCTCCTTCCACGGCAGCTCTGAATCGCACACCACCCTTCAGCCTACCAACCCCTACAGCGCCACCAAAGCTGCCGCCGAGATGCTTGTCAAAGCATACTCCTGCTCCTACAACCTTCCCGCCATCATCACTCGCGGCAACAACGTATATGGCCCTCAGCAATTCCCAGACAAACTTGTGCGCCCTCCACTTCCGCCCTCGCTCCCGTCTCCTTCACGCTCACGTGATTTCTCATCACTTGCTCCGAAGCTGCTGTTTCTCGCAGATCCCCAAATTCTCGGTGCTTGCGCACCTTGGAAAGAAGCTCCCGGTTCATGGCTCAGGTAG
PROTEIN sequence
Length: 220
LDRLDYCSSRKSLRFALSKPNFKLVVGCVTQRDLVNFLMCNEQVDTVLHLAAQTHVDTSFGSSFSYTQSNVYGTHVMLECARACGTVRRFLHVSTDEVYGESGVTTSGASIASFHGSSESHTTLQPTNPYSATKAAAEMLVKAYSCSYNLPAIITRGNNVYGPQQFPDKLVRPPLPPSLPSPSRSRDFSSLAPKLLFLADPQILGACAPWKEAPGSWLR*