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sw_6_scaffold_4430_1

Organism: SW_6_Viridiplantae_55_9

partial RP 24 / 55 MC: 5 BSCG 12 / 51 ASCG 7 / 38 MC: 2
Location: comp(350..1840)

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1FFZ1_MICSR similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 410.0
  • Bit_score: 369
  • Evalue 5.20e-99
U4/U6 small nuclear ribonucleoprotein PRP31 {ECO:0000313|EMBL:JAC69735.1}; Flags: Fragment;; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorode similarity UNIPROT
DB: UniProtKB
  • Identity: 50.1
  • Coverage: 403.0
  • Bit_score: 384
  • Evalue 2.20e-103
SIK1; protein implicated in ribosomal biogenesis, Nop56p-like protein similarity KEGG
DB: KEGG
  • Identity: 28.8
  • Coverage: 292.0
  • Bit_score: 111
  • Evalue 5.50e-22

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1491
ATGGAGGGGGCAGAGCAGGCGCAAGCACTGGACGAAGCGTTTCTCCAAGACCTAGGGGAGCTAGAGGACGATCACGAGGACCAGAAGCAGAGCGAGGAGGCAGATGCCGCGCCCGACCAAAGCGAGCCCGAGTCAGTGGTGAGCGTGGCACGCTCCTCCCGCATCAATGATGCGCTCTCGCAGGTGGAGAAGCACGGCGAGGGCGGAGGAACGGGCGCGCTTGATGACAACGACCCGCTGTACCGCCTGATTGTGGATTGCAACCAGCTGGTCGTTGAGATTGACTCTGAGCTCTCCGATGTGCACAATTTCCTCAAAGACCGCTACCGCCGCAAGTTCCCTGAGCTCGAGTCGCTCGTGCAACATTCCGTCGATTACGCCCGTGTCGTCAAGGCCATCGGCAACCAGACCGACCTCACCCAGGTCAACCTCGATGGCGTCCTTCCCAGCGCCACCATCATGGTCGTCACCGTCACTGGCAGCACTTCCACTGGCACCCAGCTTTCCGCCGACGAGCTCGACCGCTGCTTGCGCGCTTGCGACCTTGCACTTGAACTTAACGATGCCAAATGCAAGCTCCTCCGTTTTATCGAGGCGCAGATGGCCCGCGTTGCGCCCAACCTCTGCGCCATAACTGGATCCGAGATTGCTGCCAAGCTCATGGCCACCGCCGGTGGGCTTCATGCGCTCGCGAAGACCCCCGGATGCAACATCCAGGTGATCGGTGCGAAGAGGAAGCCCCTCGCCGGCTTCTCCACGCAATCAGCACAGCAGAGCGGTAACTTGCACGCTGGCTATCTATTTAATACTCAGCTCATTCAGCATGAGACTCCGCCAGCACTTCGCAAAGCTGCGCTTCGTATGATGGCCGGCAAAGTTGCTCTCATGGCTCGCAAGGACGCGTTTGGACACGACCCTCAAGGCTCGACCGGACAGCAGCTAAAGCAAGAGATGTGTAATAAAATCGAAAAGTGGCAAGAGCCAGCACCTGCTCGTATTGTGCAACCGATGAAGAAACCTGAGGACAACAATCGCACGCGTCGAGGCGGCAAGCGCAAACGCAAGCAAAAAGACATGCTGGAGATGACAGAGGTGCGCAAACAGGCAAACCGGGTCGGATTCAACCAACCTGAGGAGGACATCGGCCAAGAAGAAGGTACAATGGATTTTGATTGTCCCTTCCAATTAATTAGAGCTTGCTTGTTTGGTGAGAGCGTGTCCTTGTCTTGCTCCACGTTGCATCGCAGTTGGCGAGGGTATGGGCCAACTCGGAAGCGGCGGTGGTGTGTCAGGACGTGTCCGAGCGCCAGCACAAAAAAGCAAAGCGTTACAGCGAGCTTCGAAGCACAGTCAGCAGCGACGCAATATTACTGGCAACCAGAACAGCGGCGCATCTCAGAGTGGCACAGCGTCGAGCCTTTCCTTTACTCCTGCACAGGGCATCGAACTCGCGGACCCGAACTCAAGGACTCCATCCCTCGGGACCGGTGA
PROTEIN sequence
Length: 497
MEGAEQAQALDEAFLQDLGELEDDHEDQKQSEEADAAPDQSEPESVVSVARSSRINDALSQVEKHGEGGGTGALDDNDPLYRLIVDCNQLVVEIDSELSDVHNFLKDRYRRKFPELESLVQHSVDYARVVKAIGNQTDLTQVNLDGVLPSATIMVVTVTGSTSTGTQLSADELDRCLRACDLALELNDAKCKLLRFIEAQMARVAPNLCAITGSEIAAKLMATAGGLHALAKTPGCNIQVIGAKRKPLAGFSTQSAQQSGNLHAGYLFNTQLIQHETPPALRKAALRMMAGKVALMARKDAFGHDPQGSTGQQLKQEMCNKIEKWQEPAPARIVQPMKKPEDNNRTRRGGKRKRKQKDMLEMTEVRKQANRVGFNQPEEDIGQEEGTMDFDCPFQLIRACLFGESVSLSCSTLHRSWRGYGPTRKRRWCVRTCPSASTKKQSVTASFEAQSAATQYYWQPEQRRISEWHSVEPFLYSCTGHRTRGPELKDSIPRDR*