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sw_6_scaffold_5620_1

Organism: SW_6_Viridiplantae_55_9

partial RP 24 / 55 MC: 5 BSCG 12 / 51 ASCG 7 / 38 MC: 2
Location: comp(2..745)

Top 3 Functional Annotations

Value Algorithm Source
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=51351 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatop similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 258.0
  • Bit_score: 149
  • Evalue 7.70e-33
Homoserine dehydrogenase n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4CDS1_BRARP similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 258.0
  • Bit_score: 148
  • Evalue 9.30e-33
hom; homoserine dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 256.0
  • Bit_score: 117
  • Evalue 6.50e-24

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Taxonomy

Brassica rapa → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 744
GTGGTGCTGGGGCTTGGAAGCGTTGGCAGGCGGCTCGGACGTCTCGTGAGCTCTGCTTCTCATCCCGGGCTGGGCGCGCCCGCGGGCGGCGGCGGGCATCCAGCATCGCTATCCGTCGCAGGCGTCGCTGACTCCTCCACTGTGGTCTACTCTTCCTCTGGGTCCCTTCCGCCGGAGTCTCTCGAAGCGCTCGTCCAGCGCAAGGAATCATCTTCCCCGGAGGGCAACCTTGCCGAGCTTGGTGAACATCATTCGCTCAGCGTTGCCTCCACTGACTCGCTTCCCCAGCTCGTCCAATCCCACGGTGATCTCTGCGGCTGTGTTGTTGCGGACTGCACCGCTTCGCTCGCTTCGCTTGATGTTCTGTGCGAGAGCCTTCGCAATGGTGGTGCCGTTGCTCTTGCCAACAAAAAACACGTCGGCGGCTCGCTTGAGCACTACCAGAGCCTTGTTGACGCCGAGGCTGAGGGTGGTGGCTTTGGCGGTCGGCTGCGCTTTGAAAGTGCTTGCGGTGCTGGCACACCAATGGTTGTGTCCGCACAGCGCCTGGGGCTTGGGAACGACCGCGTGCATTCCATCGTTGGCTCGCTCAGCGGCACGCTCGGCGTTGTGTGCGATGCGCTGAACAACGGCACGCCGCTTGCTGATGCCGTTGAATTTGCGCATTGGCACGGCCTCACAGAGCCTGACCCACGGGACGATCTTGGCGGCGAAGATGTACACAGAAAGGCACTTGTGCTCGCT
PROTEIN sequence
Length: 248
VVLGLGSVGRRLGRLVSSASHPGLGAPAGGGGHPASLSVAGVADSSTVVYSSSGSLPPESLEALVQRKESSSPEGNLAELGEHHSLSVASTDSLPQLVQSHGDLCGCVVADCTASLASLDVLCESLRNGGAVALANKKHVGGSLEHYQSLVDAEAEGGGFGGRLRFESACGAGTPMVVSAQRLGLGNDRVHSIVGSLSGTLGVVCDALNNGTPLADAVEFAHWHGLTEPDPRDDLGGEDVHRKALVLA