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sw_6_scaffold_5735_2

Organism: SW_6_Viridiplantae_55_9

partial RP 24 / 55 MC: 5 BSCG 12 / 51 ASCG 7 / 38 MC: 2
Location: comp(1283..2254)

Top 3 Functional Annotations

Value Algorithm Source
Splicing factor U2AF 65 kDa subunit n=2 Tax=Zea mays RepID=B4FD21_MAIZE similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 267.0
  • Bit_score: 225
  • Evalue 7.90e-56
Uncharacterized protein {ECO:0000313|EMBL:AFW60142.1, ECO:0000313|EnsemblPlants:GRMZM2G057450_P04}; TaxID=4577 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 267.0
  • Bit_score: 225
  • Evalue 1.10e-55
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 116.0
  • Bit_score: 66
  • Evalue 2.20e-08

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Taxonomy

Zea mays → Zea → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 972
AACCCCGCCATTGCCGCGCAGCTCGGGCCCGCCTATCCCTCTGAATCCCTTAACCTCGCTGCCATCGGCCTCGCTCCCGTCCAACCCCCCGGCTCCCAGCAACCGCAACAAGAGCAACATCAGCAACCCCCGCCACCACCTCCACCTCCTGCTCATGGCGATGCTGGCTCGAACCCTCCGCAGCCCCAACCTGAAGCCGCCGCTCGCGCTGCCGCCGCCGTTGCTGAGAAGTACGCGCCTCAACAGCAGCAGCAGCAACCGCGGTACGCCAATCAACAAGCACAAGGCCCCGATCGCATCTTCATCGGTGGCTTGCCGTACCACTTGGACGAGACCCAAGTTCGTGACTTGATGGAGAGCTTCGGTAAGCTGAAGGCGCTTGACCTCATTCGAGATCGGGAAACCGGCACGTCCAAGGGGTACGCCTTCTGCGTGTACGAAGACGCAAGCGTCACGGACGCTGCGTGCACCGGACTGAACGGATTACGCTTCGGTGAGCGTGTGCTCACCGTTCGTCGAGCCGACCAAGGCGGGAAGCAAAAGCAGCCGCAGCAGAACCCGGAGCAGATGCAGACAGTGCTGCAGCAGGCTGCGCAGAAAGCTGATCCTGAAGCAAGAAGCGCGCTTAATACAGAGCAGCAGCCAACGTCGGTGGTTGTGCTCACCAACTGCGTTGACGCAGACGAGCTGCAAGATGAAAGTGAGTTTGAAGATATTAAAGCCGACATGGAGGATGAATGCTCCAAGCACGGAAAGGTGCAGTGCGTGCACATCCCGCAGCCAGCGACACAAAGTGGCGAGCAGCAGCAGCAGGTGGTGGGGTTGGGGAAGGTATTTGTGCAGTACGAAGACGTAGCATCGGCTTTGAGAGCGCGTGCTGCGCTGCACGGGCGTGAATTCGCAGGGAAGAGTGTGAACGTGAGCTTTCTGGACGAGCGCAAGTTCGCGTCGGGTCAGCTGGAGGAGGGATAG
PROTEIN sequence
Length: 324
NPAIAAQLGPAYPSESLNLAAIGLAPVQPPGSQQPQQEQHQQPPPPPPPPAHGDAGSNPPQPQPEAAARAAAAVAEKYAPQQQQQQPRYANQQAQGPDRIFIGGLPYHLDETQVRDLMESFGKLKALDLIRDRETGTSKGYAFCVYEDASVTDAACTGLNGLRFGERVLTVRRADQGGKQKQPQQNPEQMQTVLQQAAQKADPEARSALNTEQQPTSVVVLTNCVDADELQDESEFEDIKADMEDECSKHGKVQCVHIPQPATQSGEQQQQVVGLGKVFVQYEDVASALRARAALHGREFAGKSVNVSFLDERKFASGQLEEG*