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SW_6_Viridiplantae_55_9

SW_6_Eukaryota_56_9

In projects: SW_6

Consensus taxonomy: Eukaryota

Taxonomy override: Eukaryote

Metagenomic Context

Parent: SW_6_UNK

Properties

Avg. coverage: 8.65 Longest contig: 24.05 Kbp Bin length: 2.58 Mbp GC content: 55.78 %

Contigs count: 566 Features count: 2350 rRNAs count: 0 tRNAs count: 1

Genome completeness

partial RP 24 / 55 MC: 5 BSCG 12 / 51 ASCG 7 / 38 MC: 2

Displaying items 551-566 of 566 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_6_scaffold_5264 Species: Bathycoccus prasinos (50%)	2	2392 bp	55.73	9.95	77.88
sw_6_scaffold_2685 Species: Ostreococcus 'lucimarinus' (50%)	2	3956 bp	55.03	10.01	84.10
sw_6_scaffold_16167 Species: Volvox carteri (50%)	2	1082 bp	61.55	10.07	84.84
sw_6_scaffold_3009 Species: Ostreococcus tauri (50%)	2	3620 bp	64.50	10.08	95.80
sw_6_scaffold_6379 Species: Ostreococcus 'lucimarinus' (50%)	2	2082 bp	57.78	10.13	98.99
sw_6_scaffold_6021 Species: Gossypium arboreum (50%)	2	2172 bp	61.33	10.13	82.60
sw_6_scaffold_3681 Class: rosids (50%)	4	3115 bp	55.73	10.14	71.75
sw_6_scaffold_1504 Domain: Viridiplantae (66.67%)	3	5907 bp	54.07	10.16	66.07
sw_6_scaffold_5733 Domain: Viridiplantae (66.67%)	3	3236 bp	55.59	10.29	70.46
sw_6_scaffold_4303 Species: Tetraselmis sp. GSL018 (50%)	2	2776 bp	56.38	10.30	67.33
sw_6_scaffold_1419 Domain: Viridiplantae (55.56%)	9	10546 bp	56.37	10.44	57.55
sw_6_scaffold_5617 Phylum: Chlorophyta (66.67%)	3	3315 bp	56.14	10.44	80.54
sw_6_scaffold_2362 Phylum: Chlorophyta (50%)	4	4356 bp	64.65	10.49	90.36
sw_6_scaffold_6564 Species: Musa acuminata (50%)	2	2041 bp	57.62	10.68	80.11
sw_6_scaffold_3840 Phylum: Chlorophyta (50%)	4	3012 bp	52.79	10.76	80.58
sw_6_scaffold_14990 Species: Physcomitrella patens (50%)	2	1987 bp	55.21	11.47	48.47

Displaying items 551-566 of 566 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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