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SW_6_Viridiplantae_55_9

SW_6_Eukaryota_56_9

In projects: SW_6

Consensus taxonomy: Eukaryota

Taxonomy override: Eukaryote

Metagenomic Context

Parent: SW_6_UNK

Properties

Avg. coverage: 8.65 Longest contig: 24.05 Kbp Bin length: 2.58 Mbp GC content: 55.78 %

Contigs count: 566 Features count: 2350 rRNAs count: 0 tRNAs count: 1

Genome completeness

partial RP 24 / 55 MC: 5 BSCG 12 / 51 ASCG 7 / 38 MC: 2

Displaying items 551-566 of 566 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_6_scaffold_15258 Species: Physcomitrella patens (100%)	1	1129 bp	56.95	7.09	99.91
sw_6_scaffold_7885 Species: Ostreococcus tauri (50%)	2	1800 bp	57.50	7.06	64.50
sw_6_scaffold_13770 Species: Brassica napus (100%)	1	1214 bp	56.51	7.00	99.84
sw_6_scaffold_8203 Species: Ostreococcus tauri (50%)	2	2594 bp	51.50	6.98	83.50
sw_6_scaffold_5863 Species: Tetraselmis sp. GSL018 (50%)	2	2219 bp	56.15	6.94	37.45
sw_6_scaffold_14557 Species: Volvox carteri (50%)	2	1169 bp	57.23	6.84	98.55
sw_6_scaffold_11593 Species: Arabidopsis thaliana (50%)	2	1368 bp	56.65	6.73	57.68
sw_6_scaffold_15915 Domain: Viridiplantae (66.67%)	3	1890 bp	53.60	6.72	63.65
sw_6_scaffold_18171 Species: Micromonas sp. RCC299 (50%)	4	2006 bp	56.38	6.58	74.93
sw_6_scaffold_10160 Species: Tetraselmis sp. GSL018 (50%)	2	1502 bp	56.19	6.52	80.69
sw_6_scaffold_14973 Species: Erythranthe guttata (50%)	2	1144 bp	56.21	6.47	85.75
sw_6_scaffold_7101 Species: Micromonas sp. RCC299 (100%)	1	1931 bp	56.03	6.42	78.92
sw_6_scaffold_8716 Species: Coccomyxa subellipsoidea (50%)	2	1677 bp	53.61	6.20	78.18
sw_6_scaffold_9971 Species: Tetraselmis sp. GSL018 (50%)	2	1523 bp	58.11	6.11	94.16
sw_6_scaffold_10069 Species: Coffea canephora (50%)	2	1511 bp	56.32	5.76	79.62
sw_6_scaffold_8921 Species: Chlamydomonas reinhardtii (100%)	1	2210 bp	49.77	5.29	84.43

Displaying items 551-566 of 566 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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