ggKbase home page

sw_7_scaffold_1072_15

Organism: SW_7_UNK

megabin RP 50 / 55 MC: 47 BSCG 50 / 51 MC: 41 ASCG 38 / 38 MC: 37
Location: comp(7894..9405)

Top 3 Functional Annotations

Value Algorithm Source
PUSH_ARATH Putative tRNA pseudouridine synthase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00TY6_OSTTA similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 498.0
  • Bit_score: 231
  • Evalue 1.70e-57
Pseudouridine synthase I, TruA {ECO:0000313|EMBL:CAL58263.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 33.7
  • Coverage: 498.0
  • Bit_score: 232
  • Evalue 1.10e-57
PUSH_ARATH Putative tRNA pseudouridine synthase (ISS) similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 498.0
  • Bit_score: 231
  • Evalue 5.40e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ostreococcus tauri → Ostreococcus → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1512
GTGAGCCTGCTGCTAGCGTACAACGGCCGTGAGTTCCACGGAAATGTTGCCAACTTGCGTGATCTCAACCGGGAGCAAACAGTCGATGGGGTTCTTGAGAAGGCCATGTACCACGCCGGGTGCATCCTGCCATCGAACTATGGCCGCCTCGACACAAAATCATGGCAGCACTCGTCACGCACAGACAAAGGCGTGAGCTCAACCTTCACCTGGGTGCACTCCCGGATCCTCGTGGACCCCTCGTCGCTTGCACATGAGCCTATGGGCGACACGATGTGCTCTGCCATCAATGCGCATCTGCCAGAGAGTGTGCGTGTCTTCGCTGTCATGCGTGTTCCCAAATCATTCGACCCACGTACCGCTTGCATCAGCCGCATGTACGAGTACCTTCTGCCAGCTCGTGTGCTTGCAAAACCAATCTCTGAGAGCATGCCCAAGCTTAAATCTGCTCTCTCTGCTATGGAAGGCTATAAGCCGTTCCACAACTTCACCAAACGCTCACTGTATCGCCCTCCTGCTAACGCTGTCACTCGCAAGCGCTCGCAACCCGATCATCACAGCGACACGAAAGGAACTGAAACTGACGAAGCTGCTGATGGTGACGTACAGGCTGAGAGTGACGAGCACAACGCCAGCAGCAATGAAGGCGATACCATCGATGGTCATATCGAAATGAACCACCAAGGCCAGCCTAGTGATCATCACAATCGGCATACACAAAGGGAATGCACGCGTGCTACAGCACATGATCATAATGGACCTGTGCGAGGTGCGGTTGAGCCTGGATCAAAGACACGGAACTGGTTTGCATCGTGGGTTGCGCAGGCTGACCCAAACGACCTCATTGGGCACTCACACTTCCGGAAGGTGTTTCGCTTCACGTGCGGGCAGCCACGCCGTGCGAACGGAGCACGGAGCGAGCCTGTGGAGCACAGTCTTGATGAGTGCACCATCAGTGATCCTGAAATTGGGGAGGTGTACCTCCCGATAACGGTGCACGGCAACTCGTTCATGCTGCATCAGATCAGGCGCATGGTTGGCACTGCTGTTGCTGTTGCGAACGGGCACATAAGCATGGACGCGCTTGAAGCGAGCATGAGCAGGCCCGCTCGGATGCTAACGCCCAGAGCACCAGCACAGGCACTGCTTCTCACTGGCGCTGAGTTTCGCACGTTTAAGGTTCCACCGCAAAAGGAGGAAGGCCAGATGTACGAGCCGCCCCAGAAGCTGGAGGTAACGAACGATGTGCTGGAGGAGCTCCAAAGGTTCAAGGAGCAAGTGATCGTGCCTGGGATGCTACCTGTGCTCTCTGACCAGCACTGGGATGACTGGACGTCAAAGTTGAGCGGCTTTGGGTCTGAACAAGCGCTAACGCAGCGTCAAGAGCTTGTGGACCGGTACATGGAGTACAAAGCCACAAAGCCAGAGCATGTGAAAACGAAGGAGGAGGAAGAGAAGCGCAACCGTGTGATGCAGGCGAACAAGCACAACGTGCAAGGCGTTGTCGGTTGA
PROTEIN sequence
Length: 504
VSLLLAYNGREFHGNVANLRDLNREQTVDGVLEKAMYHAGCILPSNYGRLDTKSWQHSSRTDKGVSSTFTWVHSRILVDPSSLAHEPMGDTMCSAINAHLPESVRVFAVMRVPKSFDPRTACISRMYEYLLPARVLAKPISESMPKLKSALSAMEGYKPFHNFTKRSLYRPPANAVTRKRSQPDHHSDTKGTETDEAADGDVQAESDEHNASSNEGDTIDGHIEMNHQGQPSDHHNRHTQRECTRATAHDHNGPVRGAVEPGSKTRNWFASWVAQADPNDLIGHSHFRKVFRFTCGQPRRANGARSEPVEHSLDECTISDPEIGEVYLPITVHGNSFMLHQIRRMVGTAVAVANGHISMDALEASMSRPARMLTPRAPAQALLLTGAEFRTFKVPPQKEEGQMYEPPQKLEVTNDVLEELQRFKEQVIVPGMLPVLSDQHWDDWTSKLSGFGSEQALTQRQELVDRYMEYKATKPEHVKTKEEEEKRNRVMQANKHNVQGVVG*