ggKbase home page

sw_7_scaffold_1530_1

Organism: SW_7_UNK

megabin RP 50 / 55 MC: 47 BSCG 50 / 51 MC: 41 ASCG 38 / 38 MC: 37
Location: 3..2516

Top 3 Functional Annotations

Value Algorithm Source
mRNA splicing protein n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1EFS7_MICSR similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 844.0
  • Bit_score: 948
  • Evalue 5.90e-273
Pre-mRNA-processing factor 6 {ECO:0000313|EMBL:JAC81218.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 836.0
  • Bit_score: 983
  • Evalue 1.40e-283
mRNA splicing protein similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 844.0
  • Bit_score: 948
  • Evalue 1.90e-273

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 2514
GAGCAGGCGTACGCCTCAATCGATGAGTACATGGCTGAGAAACGCAAGCGCTCTAGGCCCGCGAGCTCCACTGCACAATCCCCCGCCGATGTCAGCAGCAACGCCAATGCACACCTCTCCGAACAGTTCGCCGACATCAAACGCCAGCTCCGCGATGTCTCCGAGCAAGAATGGAACGCCATCCCCGACATCGGTGATACCAGCGCCAAGAAGCAGAAGCGCACCGCCTACGTGCCCCCGCCCGACAGTCTCCTTGCTAAAGCAGCTGCCGAGAAGCAGGTTGCCAGCACCCTCGACGGCGCCCTCCCTCCGCAGCAGGACAGCAACGCTCGCTCCCAGCAAACTTCCAACGGAAATGCTCATAGCGACGGCGCTGCCACCGACCTCACAGCTGTTGGAGAGGGTCGCGGCACCGTGCTTGGTCTCAAGCTCGACCGCATGGCCGACAGCGTCAGCGGCCAGACAGTGGTCGATCCAAAAAGCTACATGTCCGGCCTGCAAAGCATGCGTGTCAGCAGCGACGCCGAAGTGAGCGACATTAAGAAGGCTCGTCTGCTCCTTAAGAGCGTCATTGGTACAAATCCCTCCCATGCCCCGGGATGGATCGCTGCCGCAAGGCTTGAAGAGCTCGCTGGTAAGGTCCAGACTGCTCGCAAATACATTCAGCAAGGTACGGAGCACTGTCCACAGAACGAGGATGTGTGGCTCGAAGCAAGCAGGTTGCAGAACAATGACAATGCGAAAGCGGTGCTCGCCCGCGCTGTGGCGAACCTTCCGCAGAGCGTGAAGCTTTGGATGCAAGCAGCACAGCTTGAAGAGACAAACGATCGAAAAAAAAAGGTGCTACGGCGGGGCCTGGAGCAGTGTCCCAACTCTGTGCGTCTTTGGAAAGCTCTCGTCGAGCTATCCTCCGAAGAGGATGCTCGGGTCTTGCTGTACAGAGCTGTTGAATGCTGCCCTCAACACGTGGAGCTGTGGCTTGCACTTGCACGGCTTGAGTCATACGAGAACGCGCGCAAAGTGCTAAACAAGGCACGTGAGACCGTGCCGACCGAACCGACTATCTGGATCACAGCTGCTAAGCTTGAAGAGGCGAATGGTAACGAACAGATGGTTGGCAAAATCTTACCAAGAGCATTGAAATCATTGCAGTCCCACAGTGTTGTCATTGATCGTGACTGGTGGCTGAAAGAGGCGGAGTCGTGCGAAAAGTCTGATCCACCGTCGTTCGCTGTGTGCAGAGCAATTGTGGACAATGTGGTCGGCTTTGGAGTTGAGCAGGAAGACAAGAAGCGAACCTGGCTTGGCGATGCACAGGAGTTCATGAAGAAAGGGAGCATACGCACGGCAAGAGCAATGTACAGACAAGTGTGTGAAGAATTTGCTTCTCATGAGGATGTTTGGCTGGAAGCCGCTGAGCTTGAACGTAACCATTTTGATCGAGAATCGCTGGATGAGCTGCTGCAGCGCGCTGGGACGAATTGTCCACACGCGGAGGATTTATGGCTTATGGCAGCGAAGGAGCGATGGCTGAATGGCAATGTAAAAGGTGCCCGTCAAGTGCTAAAAGAGGCATTCCAAGCCAATCCTCAGAGCGAAGAGGTGTGGCTGGCTGCTTTCAAGCTGGAGTTTGAGAACTACGAGTTCGAACGCGCGCGCGCATTGATTCGCAAAGCGACTGAGAGCAGTGCTGATGGCGGCACTGAGCGGATGTGGATGAAAGCTGCGATTGTTGAGCGGCACATTGGCAACGAAGAAGAGGAAGCACGCATGCTTGACAAAGGCCTTGAGTTACATCCAGGCTTCTTTAAACTCTGGCTTATGCGAGGGCAGCAGCATGAGCGGAATGACCGAGTGAAGGAGGCAAGGGAGACATACTTGACGGGAGCGAGGCAGTGTCCGCAATGCGTGCCGTTGTGGCGCTCGCTGGCGTCGCTAGAGGAAAGAAATGGCAACGTGTCGAGGGCGAGAGCCCTGCTGGAGCAAGCGCGGTTGAAGGTGCCAAAGAACGAGGAACTGTGGCTTGCGTCGGTGCGGATGGAGCGACGAAGCGGGAATGAGCGCTCGGCGGACGCAGTGATGGCGAAGGCGCTGCAGGAGCTGCCAAAGGCCGGGAAGTTGTGGGCGGAGAGCGTGAAGATGACGCCAAAGGCGAAGCAGAAGAGCAAGAGTGTGGACGCGCTGAGAAACTGCGACAACGATCCGAGCGTGGTGTGCGAGATTGCATTCTTGTTTTGGCAGGACAGAAAGACGCAAAAGGCAAGGGCATGGATGAACAGAGCAGTGACGCTGAGTCCGGGAACAGGGGATCTGTGGGCGGCATACTACTGGTTCGAAAGGGAGCAGGGAACGGAGAGCAGCAGGAAAGAGGTGGAGGAGCGATGCGAAGCGGCAGAGCCGAGGCATGGCGAGCGGTGGCAGAGGGTGAGCAAGCAGGTGTCCAGCGGTCACAAAGGAGTGAAAGAGGTGCTGAAGGAGGTGGTGGAGGACTTCAAGCAGAGAGAGGCGCCATAA
PROTEIN sequence
Length: 838
EQAYASIDEYMAEKRKRSRPASSTAQSPADVSSNANAHLSEQFADIKRQLRDVSEQEWNAIPDIGDTSAKKQKRTAYVPPPDSLLAKAAAEKQVASTLDGALPPQQDSNARSQQTSNGNAHSDGAATDLTAVGEGRGTVLGLKLDRMADSVSGQTVVDPKSYMSGLQSMRVSSDAEVSDIKKARLLLKSVIGTNPSHAPGWIAAARLEELAGKVQTARKYIQQGTEHCPQNEDVWLEASRLQNNDNAKAVLARAVANLPQSVKLWMQAAQLEETNDRKKKVLRRGLEQCPNSVRLWKALVELSSEEDARVLLYRAVECCPQHVELWLALARLESYENARKVLNKARETVPTEPTIWITAAKLEEANGNEQMVGKILPRALKSLQSHSVVIDRDWWLKEAESCEKSDPPSFAVCRAIVDNVVGFGVEQEDKKRTWLGDAQEFMKKGSIRTARAMYRQVCEEFASHEDVWLEAAELERNHFDRESLDELLQRAGTNCPHAEDLWLMAAKERWLNGNVKGARQVLKEAFQANPQSEEVWLAAFKLEFENYEFERARALIRKATESSADGGTERMWMKAAIVERHIGNEEEEARMLDKGLELHPGFFKLWLMRGQQHERNDRVKEARETYLTGARQCPQCVPLWRSLASLEERNGNVSRARALLEQARLKVPKNEELWLASVRMERRSGNERSADAVMAKALQELPKAGKLWAESVKMTPKAKQKSKSVDALRNCDNDPSVVCEIAFLFWQDRKTQKARAWMNRAVTLSPGTGDLWAAYYWFEREQGTESSRKEVEERCEAAEPRHGERWQRVSKQVSSGHKGVKEVLKEVVEDFKQREAP*