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sw_7_scaffold_2424_12

Organism: SW_7_Nanohaloarchaea_46_7

near complete RP 31 / 55 MC: 9 BSCG 18 / 51 MC: 3 ASCG 31 / 38 MC: 2
Location: comp(7810..8316)

Top 3 Functional Annotations

Value Algorithm Source
rps13p; 30S ribosomal protein S13p; K02952 small subunit ribosomal protein S13 id=18314580 bin=Nanosalina species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Nanosalina similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 161.0
  • Bit_score: 217
  • Evalue 1.50e-53
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 161.0
  • Bit_score: 217
  • Evalue 2.00e-53
30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 140.0
  • Bit_score: 146
  • Evalue 8.90e-33

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Notes

Nanohaloarchaea? Kari Finstad (2/6/15)

Taxonomy

Candidatus Nanosalina sp. J07AB43 → Candidatus Nanosalina → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 507
ATGGTTAAGTTACTAGGCCTGAGTCAACCCTTTATAAGATTTAACAAAGATGATTCTGTTACGGGTTTGAACATGTCAGAGACAAAAGAAGTCGTAAGGATTGCACGAACCGGTATCGACGGTACGAAGCCGGTAAGCAAAGCTATCACAGCACTGAAAGGAGTCGGACCGATGTACGCTAATGCAGTTGCAGAAGGCCTCGGCTACGAAGAAAAGAAGATAGGAGACCTAGGCGAAGAAGAAATAGATGACATAGAAGAAGCTATCAAGAACCCGGACCAGCTTGACGTCCCTGACTGGCTTAGAAACCGCAGAAAGGACAGAGAGACTGGAGAAAATACACACTTAATCGAATCCGACCTCGAACTCAAGGAAGAGTTCGATATCAGAAGACTCAAGGAAATCGGGTCTTACAAAGGTTGGAGACACGAAATCGGCCTCCCTGTAAGAGGAGCAAGAATCCAGGAAGAGGCCTCAGAAGGATCTTCCGACGGAGATGAGGAATAG
PROTEIN sequence
Length: 169
MVKLLGLSQPFIRFNKDDSVTGLNMSETKEVVRIARTGIDGTKPVSKAITALKGVGPMYANAVAEGLGYEEKKIGDLGEEEIDDIEEAIKNPDQLDVPDWLRNRRKDRETGENTHLIESDLELKEEFDIRRLKEIGSYKGWRHEIGLPVRGARIQEEASEGSSDGDEE*