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sw_7_scaffold_1183_8

Organism: SW_7_Actinobacteria_72_16

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(7240..7785)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036C79AB similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 179.0
  • Bit_score: 171
  • Evalue 7.60e-40
LOG family protein similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 173.0
  • Bit_score: 171
  • Evalue 2.80e-40
Lysine decarboxylase {ECO:0000313|EMBL:EFO29577.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4 similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 184.0
  • Bit_score: 171
  • Evalue 1.40e-39

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Taxonomy

Roseibium sp. TrichSKD4 → Roseibium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGACCGAGATCCGCGCGGTGTGTGTGTTCTGTGCCTCCAGCGAGGGCGCGGCGGCCCGCGACCGCAAGCTCGCCCACGAGCTGGGCACGGCCATCGCCGAGCGTGGCTGGCGGCTGGTGTACGGCGGCGGCGACGTCGGCCTCATGGGAGAGGTGGCCCACGCCGCCTTGGCCGCCGCGGGCGGCGTCACCGGGGTGATTCCCCGCAAGCTGGTCACCCACGAGCTGGCCCTGCGCGAGGTCGACGAGCTGGTGGTCACCGAGTCGATGCGCGAGCGTCAGCGGATCATGGACGAGCGCAGCGACGCGTTCGTGGTCTTGCCCGGCGGGCTGGGCACGTTGGCCGAGCTGTTGGAGATGCTCACGCTGGCCCAGCTGGGCTATCACGACCGCCCGGTGGTGCTGTTGGACCCTGACGGCTTCTGGCAGCCGCTGCGCCACCAGCTCGAGGCGGCTGCCGCCCGCGGTCTGGCCAACTCCCAGCCCGAGGCGCTGACGGCGCCGGCCGACAGCGTCGTGGCGGCCCTGGCCCGCCTGGCGTCCTGA
PROTEIN sequence
Length: 182
MTEIRAVCVFCASSEGAAARDRKLAHELGTAIAERGWRLVYGGGDVGLMGEVAHAALAAAGGVTGVIPRKLVTHELALREVDELVVTESMRERQRIMDERSDAFVVLPGGLGTLAELLEMLTLAQLGYHDRPVVLLDPDGFWQPLRHQLEAAAARGLANSQPEALTAPADSVVAALARLAS*