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sw_7_scaffold_1713_5

Organism: SW_7_Actinobacteria_72_16

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 6602..7192

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDN0_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 184.0
  • Bit_score: 148
  • Evalue 5.70e-33
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Actinobacteria_67_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 199.0
  • Bit_score: 155
  • Evalue 6.50e-35
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 185.0
  • Bit_score: 148
  • Evalue 1.60e-33

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Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GTGGAGAAGTTCGACTGGCGCCATGGCTTCAAGTTCTCGACCTATGCCACGTGGTGGATTCGCCAGGCCATCCAGCGTGGCGTCGCCGGCGGCGAGCGCACCATCCGCCTGCCGGAAACGCTGCACGACGCGCTGATCAAGGTACGCGCCGCGCGGGCGCGCCTGGAGGCCGAGCTCGGCGAGGGGCCCGACGTCGCCGATCTGGCCAGCGCCACCCACCTGTCGCCGGAGCTGGTCGCCCGCGCCATCGACGCCGAGCACCCGACCACGTCGCTGGACCGGGCCGTGGGCGGCGACGAGGACAGCGCCGATCTGGGCGACTTCGTGGCCATCGCCGACGACGAGCCCGACGAGGAGGTGGTGCGCGCCACCTGGCACACCGAGGTGGTCTCTCTGGCGCGCCAGCACCTCGACGAGCGCAGCTGGCGGGTGCTGAGCCGGCGCTTCGGCTTGGACGGCACGGAGCCGGTGACCCTGGACGCGCTGGGCCGCGAGCTGGAATTGTCGCGCGAGTCGGTGCGCAAGATCGAGCGTCAGGCGCTGCGCACCCTCCGCGGGCTGCTGGGCCAGGACCAAGCCGTGCTGGCCTGA
PROTEIN sequence
Length: 197
VEKFDWRHGFKFSTYATWWIRQAIQRGVAGGERTIRLPETLHDALIKVRAARARLEAELGEGPDVADLASATHLSPELVARAIDAEHPTTSLDRAVGGDEDSADLGDFVAIADDEPDEEVVRATWHTEVVSLARQHLDERSWRVLSRRFGLDGTEPVTLDALGRELELSRESVRKIERQALRTLRGLLGQDQAVLA*