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sw_7_scaffold_3444_4

Organism: SW_7_Actinobacteria_72_16

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 3877..5415

Top 3 Functional Annotations

Value Algorithm Source
Capsular exopolysaccharide family n=1 Tax=Frankia sp. CN3 RepID=G6H9Q9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 465.0
  • Bit_score: 296
  • Evalue 5.70e-77
lipopolysaccharide biosynthesis protein Tax=RBG_16_Actinobacteria_70_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 481.0
  • Bit_score: 301
  • Evalue 2.50e-78
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 480.0
  • Bit_score: 277
  • Evalue 1.00e-71

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Taxonomy

RBG_16_Actinobacteria_70_17_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGCTGCGCCCTGGCGCCCGGGGGAGGGTGCACGGCCAGCCGGCGCCGACCAAGACGAGGGGCTTGGTGCAACCCCTGCCCGAGGCGGCTCGCATCAGTGTGGACCGTGGCCAGCAAGTCGAGGTGGTCCAGTCGCAGCGGGTGGCCGAGGCCGCCGCGGAGCGCCTCGGCGAGCAGGTCACCCCCGAGCAGGTGATGGCACGGGTCACCGCCTCAACCGGGCAGCGAAGCATCGCCATCGACGTCACGGCCGCCCACGCGACGCCACAGGGGGCGGCGTCGACCGCGGACGCGGTGGCGCGGGCCTACCGCGAGGTCACCAGCGCCCAGGCCCAACAGCGGATCGAGAGCACCATCACCCACCTCGAGCAGGAGCGCACCGAGACAAAGCAGCGGATCCAACAGCTCCAGGCAGAGCTGCCCGACGATCGCGACCCCGCCGGCGACACCGTCGCCGAAGCCGAAGTCCGTGCCGCCATCAGCCGACTGACGTCACTGGATCAGCGGATCCAACAGCTGACCACAAACGCGGCCCTGTTCGGCTCGGTGGTCGACGCCGTCGAGCCCGCCGAGCCACCGGCTGAGCCCGCCCAACCCCGGCCGGTGCGCAACGCCGGGCTGGGCGCGCTGCTGGGGCTGGCCGCCGCGCTCGGGGTGGCGCTGTGGCGCGACGAACGCACCCGCAGCGTCGAGGGCGAGCAGGAGCCGCTGGCGCTGGTGGGGGCGCCGCTGCTGGGCGTCGTGCCCGACCACGGCGCCAAGGAGGCCAACGAGGGGCCGGCGATCGAGGCGGCCGGCACCCGCTTAGCCGAGAGCTATCAGTTCGTGGTCGCCTCGATGGAGATCGCGCTGCGCGATCACAGCGGCGGCTCAACGGTGGCGATCATCAGCGCCACCCCCCGCGAGGGCAAGACGCAGGTGGCGCTGAACCTCGCGGTGGCAGCGCTGGGCAGTGGCCGCGACGTGCTGCTGGTCGACGCCGACGAGCGCAAGGGGGTGCTGACCGACCTCAGCCCGTGTGCCCCGGAGCCGGGGCTGACCAATATCGGCCAGCCGGCGGTGGCGCTCACCGGCTGCGTGGCCGGGTGGCCAACGGGCTCGGCGACGCTGCCGTTCGTGCCAGCCGGTCAGCCAAGCGGCGACCCAGCGGCGTTCTTTCGCTCGGTGGCGTTTCGGGATGCCTTCGCCGAGCTCCGCGCTCGCGCCGACATGATGGTGGTGGACACCCCGCCGTTGCTGGCGGTGGCCGACACCTCGGAGCTGGCCGACCAAGTCGACGGGTTAGTGGTCGTGGTCGAGCGCGGCACGCCGGTGCGCGCTCTCCAAGAGCTGGGCCGCCGTTTGGCGTTTGTGGGCACGCCGGTGCTGGGCTATGTGTTCAACCGCGCCTCCAGCCGGTGGGGCCACGGCTACTCGTACGACTACGGCTACTACGGCAGCGACGGATCCGTGCCCGCTGGCGCCAGCAGCGACAACGGCCACCGGCCCCGACCTGCCCAAGACCGCCGGCGGCGTCGCGAGGCCCGTCCGGCCCAGTGA
PROTEIN sequence
Length: 513
MLRPGARGRVHGQPAPTKTRGLVQPLPEAARISVDRGQQVEVVQSQRVAEAAAERLGEQVTPEQVMARVTASTGQRSIAIDVTAAHATPQGAASTADAVARAYREVTSAQAQQRIESTITHLEQERTETKQRIQQLQAELPDDRDPAGDTVAEAEVRAAISRLTSLDQRIQQLTTNAALFGSVVDAVEPAEPPAEPAQPRPVRNAGLGALLGLAAALGVALWRDERTRSVEGEQEPLALVGAPLLGVVPDHGAKEANEGPAIEAAGTRLAESYQFVVASMEIALRDHSGGSTVAIISATPREGKTQVALNLAVAALGSGRDVLLVDADERKGVLTDLSPCAPEPGLTNIGQPAVALTGCVAGWPTGSATLPFVPAGQPSGDPAAFFRSVAFRDAFAELRARADMMVVDTPPLLAVADTSELADQVDGLVVVVERGTPVRALQELGRRLAFVGTPVLGYVFNRASSRWGHGYSYDYGYYGSDGSVPAGASSDNGHRPRPAQDRRRRREARPAQ*