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sw_7_scaffold_2420_1

Organism: SW_7_Actinobacteria_72_16

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 1..3624

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1609133 species="Bacteria; A similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 999.99
  • Bit_score: 1075
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NG14_KITSK similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 999.99
  • Bit_score: 1071
  • Evalue 0.0
mfd; putative transcription-repair-coupling factor similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 999.99
  • Bit_score: 1071
  • Evalue 0.0

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Taxonomy

Streptomyces sp. NRRL S-495 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3624
CAAGGCGCGCGCCCCGCCTTGCCGGGGCTGACCCGGCACGCGACCATGGCGCGGCCGATGGCTGCCTGTGTCGCCGGTCCGCTGGCCGCCCTGGTGGACGCCGGCCGCGACCGTCTCGCCGATGAGCTGCAGCCCGGCCGGTTGACGGTCGGGCCGGCGGCGCGCCCCTACGCGCTCGCCCTGTTGGCCGAGCGCGCCGCGCCGCTGTTGGTGGTGACTGCCACCGACCGTGACGTTGACGCGGTCGTCGACGACCTCGGGGCGTTTCTCGGCGAGGACGCCGTGGCGGCCTTTCCCGCGTGGGAGACGCTGCCCCACGAGCGGCTCAGCCCCCAGCCGGCGACGGTGGGCCAACGCCTGGCGGTGCTGCACCGCCTGCGCAAGCCCGAGGAGGGCGACAGCCCACCCGAGGCCGCGGGCGGCACGGGCGAGGCCAGGCGCGCAGGCCTGGCGGCGCTCGTCGCGCCGGTTCGGGCCCTGCTGCAGCCCATGGACCCCCGCTTGGCCGAGCGCGACCCGCTGGTGGTCGACGGGGCCTACGCCGGCGGCCTGGACGGGTTGGTACACGCCCTGGCCACGCTGGGCTACACGCGCAGCCGCACGGTGGAGCAGCGCGGGGAGTTCGCCGTGCGCGGCGGGCTGGTCGACGTGTTTCCCACCGCCGCCGAGCTGCCGGTGCGCATCGAGTTCTTCGGCGACGACGTCGACAGCCTGCGGCGCTTCCACGTCGCCGATCAGCGCAGCGAGGACCATCTCGAGCGGGCGGTCATCGATCCGGCCCGCGAGGTCGTGCTGGACGCCGACACCGCCGACACCGCCCGGCGCGTCGCCGCGCAGGTCCCCGAGCTCGCCGACGAGCTAGGCCGGCTGGCCGACGGCGTGGCCTTCGAGGGCATGGAGGCGTTGGTCACCGCCATCCACCCGCGCCCGGCCCACCTTCCCGACTTCCTGCCCGCCGGGGCCGGGCTGGCCGTCATCGACGCCCCCCAGGTCGCCGAGCGCGCCGAGCAGCTGCGCGCCGAGGCCCGCGAGCTGCTGGTGGCCGGCTGGACCTCCACCGGCGAGGACACCTCGGCCGGCCACGACCCGGGCGCGACCGGCGTGAGAGGGCTGGCGCGGCTGCTCAGCGGGGTCGCGGACTCAGGCGACGAGTCCCGCGACGAGGTCGGCTTCGCCGACTGGGACACGGTGCGCCAGGCCAGCGGCGAGCCGCAGTGGGAGCTCAGCGCGTTTGGCTCGGCCAGCCGCGACGTGCCGGCTACGGCGTGGGACTCCTTTCGCGGCGACATGGCCGGGGTGGCCGGCACGGTGCGCCGCCTGGCGGGACAAGGGGCCACGGTGGTGCTGACCGCTGCGGGTCACGGGTCGGCGCGTCGCTTGGCAGAGGTGCTGCGCGACGAGGGCGTGGCCGCCCCCGTCGTGACCCGGCTGGAGCCGCCCGAGGGCGGGCGCGTCGCGGTCGTGCCCTCCACGCTGCGCGAGGGCTTTCACAGCGACGAGCTCGGCGTGGCGCTGCTGGGCGAATGGGATCTGTTCGGTCCGCGCCGCTCGCGCTCCACGCGCCGGCTGCCCAGCCGGCGGAGCGCGACCGACGCCGTGCTCGATCTCGAGGCTGGTGATTACGTGGTCCACGCCACCCATGGCGTGGGCCGCTACGCCGGCGTGGTCACCCGCACGCTGGGCGGGCCCACCACGGCGGTGGGCGGCGTCAGCGGTCAGGTCACCCGCGACTACGTCGTGGTCGAGTACGCCGGGGGCGACACGCTGTACGTGCCCGGCGACCAGGTGGATGCGCTGACCAAGTACGTCGGGGGCGAGCAGCCGGCGGTCATGCGCCTGGGCGGCGGCGATTGGCAGCGGGCTCGCCACAAGGTCAAGGAGTCGGTCAAGGAGATGGCCGGCGAGCTGGTGCGGCTGTACCAGGCGCGCATGCACGCCACCGGCCGGGCCTTCGGGCCGGACACGCCGTGGCAGCGCGAGCTGGAGGAGGCCTTTCCCCACACCGAGACCGAGGATCAGCTCGGTGCCATCGACGACGTCAAGGCCGACCTCGAGGCGCATCAGCCCATGGACCGCCTGGTGTGTGGCGACGTCGGCTATGGCAAGACCGAGATCGCGGTGCGCGCGGCGGCCAAGGCGGTTTTCGACGGCGCCCAGGTGGCGGTGTTGGTGCCCACCACGCTGCTGGCCCAGCAGCACGGCGAGACGTTCACCGAGCGCTTCAGTGGCTTTCCGGTCGAGGTGCGTGTGCTGTCGCGCTTCGCCAGCCCCCGCGAGCAGAAGCGGACCCTGGACGGCCTGGCGGCGGGCACCGTTGACATCGTGGTGGGCACCCACCGGCTGTTGGGCTCGGACGTGGCCTTCAAGGACCTCGGGCTGATGGTGGTCGACGAGGAGCAGCGCTTCGGCGTGGCCCACAAGGAGCAGCTCAAGCGCCTGCGCACCAACGTGGACGTGTTGACCATGACCGCCACCCCCATCCCGCGCACCATGGAGCTGGCCATCACCGGCGTGCGCGACCTCTCCACGATCGACACGCCCCCCGAGGACCGCCAGCCGGTGGTCACCCACGTGGGCGAGTACGACGAGGCCACCGCGGCCCTGGCGGTGCGTCGCGAGCTGCTGCGCGAGGGCCAGGTCTTTTGGGTGCACAATCAGGTGGACACCATCGACGCGGTGACCGCCCGGGTTCGCGAGCTCGTGCCCGGCGCGCGGGTGGCGATGGCCCACGGGCGGATGAGCGAGGATGAGCTTGAACAGGTCATGGTGAGCTTCTGGCACCGCGAGCACGACGTGCTGGTGTCGACCACCATCGTCGAGTCCGGGCTGGACATCCCCAACGCCAACACGCTGATCGTGGAGCGCACCGACCTGATGGGCTTGGCCCAGATCTATCAGCTGCGCGGGCGCATCGGGCGCTCGGCCCGGCGGGGCTACGCCTACCTGTTCTTTCCCCAGGCGCGGGCGATGACCGAACAGGCCCACAAGCGCCTGGAGGCCGTGGCCGAGCACACCGGGCTGGGCTCGGGCATGTCGATTGCGCTGAAGGATTTGGAGATCCGCGGCGCCGGCGACCTGCTGTCGGGCGATCAGTCCGGCCATGTCGCCAGCGTGGGCATGGAGGAGTACGGGCGGATCATGGCCGAGGCCGTCACCGAGCTCACCGACGGCGGCGAGCCCGAGGCCGAGACCGAGCCCGAGATCCGCATCGACCTGCCGGTGGACGCCCACCTGCCGGCCGACTACATCGACGACGAGGGCCTGCGCCTGCAAGCCTACAAGCGGGTGGCCAGCGTCCGTGACAGCGCGGGGGTCAAGGCCGCCCGGGCCGAGCTCGTCGACCGCTTCGGGCCGCTGCCCGAGCCCGCCGAGCGGCTGCTGGCGGTGGCAGCGCTGCGCGCCGCGGCGCGCCGCTGGGGCATCACGGCCATCTCCACCACGCCGCGGCGCACCGCCCGGGTAGAGCCAGTGGTGCTGTCCGACGCTCAGGAGGTGCGCCTGGCCCGTCGCTTTCCCCGTGCGCGCTACAACGCGGCGGCCAGCGCCCTGGAGTTGCCGCTTCCCTCCAGCGGCGACCCGGTGGCCGCCCTCGCCGGCGACCTCAAGGCGCTGCTGGCGCCGTGA
PROTEIN sequence
Length: 1208
QGARPALPGLTRHATMARPMAACVAGPLAALVDAGRDRLADELQPGRLTVGPAARPYALALLAERAAPLLVVTATDRDVDAVVDDLGAFLGEDAVAAFPAWETLPHERLSPQPATVGQRLAVLHRLRKPEEGDSPPEAAGGTGEARRAGLAALVAPVRALLQPMDPRLAERDPLVVDGAYAGGLDGLVHALATLGYTRSRTVEQRGEFAVRGGLVDVFPTAAELPVRIEFFGDDVDSLRRFHVADQRSEDHLERAVIDPAREVVLDADTADTARRVAAQVPELADELGRLADGVAFEGMEALVTAIHPRPAHLPDFLPAGAGLAVIDAPQVAERAEQLRAEARELLVAGWTSTGEDTSAGHDPGATGVRGLARLLSGVADSGDESRDEVGFADWDTVRQASGEPQWELSAFGSASRDVPATAWDSFRGDMAGVAGTVRRLAGQGATVVLTAAGHGSARRLAEVLRDEGVAAPVVTRLEPPEGGRVAVVPSTLREGFHSDELGVALLGEWDLFGPRRSRSTRRLPSRRSATDAVLDLEAGDYVVHATHGVGRYAGVVTRTLGGPTTAVGGVSGQVTRDYVVVEYAGGDTLYVPGDQVDALTKYVGGEQPAVMRLGGGDWQRARHKVKESVKEMAGELVRLYQARMHATGRAFGPDTPWQRELEEAFPHTETEDQLGAIDDVKADLEAHQPMDRLVCGDVGYGKTEIAVRAAAKAVFDGAQVAVLVPTTLLAQQHGETFTERFSGFPVEVRVLSRFASPREQKRTLDGLAAGTVDIVVGTHRLLGSDVAFKDLGLMVVDEEQRFGVAHKEQLKRLRTNVDVLTMTATPIPRTMELAITGVRDLSTIDTPPEDRQPVVTHVGEYDEATAALAVRRELLREGQVFWVHNQVDTIDAVTARVRELVPGARVAMAHGRMSEDELEQVMVSFWHREHDVLVSTTIVESGLDIPNANTLIVERTDLMGLAQIYQLRGRIGRSARRGYAYLFFPQARAMTEQAHKRLEAVAEHTGLGSGMSIALKDLEIRGAGDLLSGDQSGHVASVGMEEYGRIMAEAVTELTDGGEPEAETEPEIRIDLPVDAHLPADYIDDEGLRLQAYKRVASVRDSAGVKAARAELVDRFGPLPEPAERLLAVAALRAAARRWGITAISTTPRRTARVEPVVLSDAQEVRLARRFPRARYNAAASALELPLPSSGDPVAALAGDLKALLAP*