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sw_7_scaffold_6612_4

Organism: SW_7_Actinobacteria_72_16

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 2685..3623

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LV58_ACIC1 similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 287.0
  • Bit_score: 297
  • Evalue 2.10e-77
RNA polymerase sigma factor WhiG similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 287.0
  • Bit_score: 297
  • Evalue 5.80e-78
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 287.0
  • Bit_score: 297
  • Evalue 2.90e-77

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Taxonomy

Acidothermus cellulolyticus → Acidothermus → Acidothermales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAGCGACTCCGCTACGCGACGAACGGCCGCACGAGGGGGGGCCACGCCGGCCCGGGGGGCGGCCGAGGACGCGGGCAGCCCCCCGGAGGCTGTCGACGAGGACGTCGCCCGGGCTGCGGCCGGCGAGGCCGCCGGCGCCGGCGGCGAGGCCAGCCCGCGGCCGGTGTCGGACGATCCCGAGGTCGTGGCGCTGTGGCGCCGGTTCAAGGCCGATGGTGACCGCGACGCCCGCGAGCGGCTCATCCTGCAGTACGCGCCGTTGGTGAAGTACGTCGCCGGGCGCGTCTCCGTGGGCCTGCCGTCGACGGTCGAGCACGGCGACCTGACGTCGTATGGGATGTTCGGCCTGATCGACGCCATCGAGCGCTTCGATCTCGACAAGGGCGTCAAGTTCGAGACGTATGCGATCAGCCGTATCCGCGGGGCGATCATCGACGAGCTGCGCTCTCTCGACTGGATCCCGCGCAGCGTGCGCAACAAGGCGCGCCGGGTGGAGCAGGCGATGTCGGCCTTGGAGCACGAGCTGGGGCGCACCCCCGGCGAGGGCGAGCTCGCCGGTCGCCTCGACGTCGACCTCGATGAGTTGCGCCGCACCCTTGCCCAAGTGTCGCTGACGTCGGTGATGGCCCTCGACGAGCCCTTCGCCGGCGAGGACGACGAGGAGGGGGGCTCGACGCTGCTGGACAAGGTGCCCGACCGGGCCTCGCCGGACCCGGAGGCCCGGTTGCAAGACTCGGAGATGCGCAAGGTGCTGTCGGACAGCGTGGCGCATCTGTCCGAGCGCGAGCGCACCGTGGTGATGCTGTACTACTTCGAGGGCATGACGCTGTCTCAGATCGGCGAGGTCCTCAGCGTCACGGAGTCGCGCGTGTGCCAGATCCACACCAAGGCGGTGCTGGGGCTGCGCACCAAGATCACCGAGCGCATCCGCGGCTAA
PROTEIN sequence
Length: 313
MSDSATRRTAARGGATPARGAAEDAGSPPEAVDEDVARAAAGEAAGAGGEASPRPVSDDPEVVALWRRFKADGDRDARERLILQYAPLVKYVAGRVSVGLPSTVEHGDLTSYGMFGLIDAIERFDLDKGVKFETYAISRIRGAIIDELRSLDWIPRSVRNKARRVEQAMSALEHELGRTPGEGELAGRLDVDLDELRRTLAQVSLTSVMALDEPFAGEDDEEGGSTLLDKVPDRASPDPEARLQDSEMRKVLSDSVAHLSERERTVVMLYYFEGMTLSQIGEVLSVTESRVCQIHTKAVLGLRTKITERIRG*