ggKbase home page

sw_7_scaffold_961_1

Organism: SW_7_Actinobacteria_72_16

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2..463)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SDW7_INTC7 similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 77.0
  • Bit_score: 69
  • Evalue 4.50e-09
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 77.0
  • Bit_score: 69
  • Evalue 1.30e-09
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:KJK12842.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 79.0
  • Bit_score: 68
  • Evalue 8.20e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Terrabacter sp. 28 → Terrabacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGCAGCCAGCAGCGATGCGCGACGAGGCAGGCGCCGTGCCATGCGATCGCCCTGTGTCGTTCGACGCCGTGGTGCGCGAGCGCTATGACCAGCTGCTGCGCCTGGCCTGGCTGCTGACAAGCGATCGCCACGAGGCCGAGGATGCCGTCGCCGAGGCGCTGGCCAAGAGCCTGCGGCGCTGGGACGCGACGTCGATCGCCAACCCGGCGGCCTACCTGCGGCGGGCGGTGGTCAACGAGGTCAACTCCTCGTTGCGCCGACTGCGCACACGGCGCACCCACCGCGCGCGCCGCCGCGTAGGCGTGCGACGTGGCACAGGCCAGCGGCAGGGGCTCGCACAGCCCGCGGCGGTGCAACGCCACGAGGTCGGCGAGGTGGGCTCGGGCGGTGTCGGCGCGGGCGGCCGTATCGCCGGCCAGCGCTGGGATGCGCGCCATGCTGGCGTGAGCCTCGCCGTCGTC
PROTEIN sequence
Length: 154
MQPAAMRDEAGAVPCDRPVSFDAVVRERYDQLLRLAWLLTSDRHEAEDAVAEALAKSLRRWDATSIANPAAYLRRAVVNEVNSSLRRLRTRRTHRARRRVGVRRGTGQRQGLAQPAAVQRHEVGEVGSGGVGAGGRIAGQRWDARHAGVSLAVV