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sw_7_scaffold_1702_8

Organism: SW_7_Haloarcula_66_18

near complete RP 32 / 55 MC: 4 BSCG 22 / 51 MC: 2 ASCG 33 / 38
Location: 6095..6379

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKD8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 94.0
  • Bit_score: 169
  • Evalue 1.50e-39
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 94.0
  • Bit_score: 169
  • Evalue 2.10e-39
tfbA; transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 90.0
  • Bit_score: 119
  • Evalue 6.50e-25

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 285
ATGGAGCCGACCGACCCGGTCCAGTACGTGCCCCGGCTCGCGTCGGACCTGGACCTGCCCGAGGAGACCAAACAGCGCGCTATCGAACTGATAGAGGCGGGCAAGGAAGCAGCCGTCCACTCGGGGAAAAACCCCGTGGGGCTCGCTGCGGCGGCCATCTACGCGGCCGGACGGCTGACGAACCTCGACGTGACCCAACACGAGGTCGCCGACGTGGCCGACGTGTCCGCCGTGACCATCCGGGACCGGTACACCGAACTGCTCGACGCCGCCCAGCAGGTCTGA
PROTEIN sequence
Length: 95
MEPTDPVQYVPRLASDLDLPEETKQRAIELIEAGKEAAVHSGKNPVGLAAAAIYAAGRLTNLDVTQHEVADVADVSAVTIRDRYTELLDAAQQV*