ggKbase home page

sw_7_scaffold_218_21

Organism: SW_7_Halobacteriales_64_20

near complete RP 33 / 55 MC: 4 BSCG 25 / 51 MC: 2 ASCG 35 / 38
Location: 19348..20142

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T282_NATMM similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 235.0
  • Bit_score: 294
  • Evalue 1.10e-76
Transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 235.0
  • Bit_score: 294
  • Evalue 3.20e-77
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrial similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 235.0
  • Bit_score: 294
  • Evalue 1.60e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natrialba magadii → Natrialba → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 795
ATGAGATCATCAATTCCAGCTCGATCCGACGCCCGAACTCGGGCACGAACGCGCGAACGGGACCAGGACTACGATCCCGATCACAGTCACGATCGCGAGAGCGAGGACCGGGAGCAGAGTCAGAAACCGAGCCGGGAACTGAGTCTGGAACGACCCGCGAGCTGTCCGGAGTGCGAATCGGCGACCGTAGAACGGAGCACGGGTGGCGAGCTGGCCTGCGGGAAGTGTGGGCTCGTCGTCGCCGAGAACGAGATCGATCGCGGCCCGGAGTGGCGCGCGTACGACTCGGCGGAACGCCGACGGAAATCCAGGGTGGGTGCCCCGGCGACGCGACGGCTCCACGACGAGGGGCTCACCACGGCGATCGACCCGCGCGACAGGGACGCGGCCGGTCGAGCGCTCCCGGAGCGCCGACGCGAGCAGGTAGCGCGGCTCCGGCAGTGGCACGAACGGATCCGGACGAGCGAGCCCAGCGAGCGCACCCTCCAGTTCGGGCTCGGCGAGATCGATCGCATGGCCTCGGCGCTGGGGCTCCCTCGATCGATCCGGGAGGTAGCGAGCGTACTCTTCCGGCGTGCGCTCGCCGACGATCTCGTTCGGGGCCGGTCGATCGAAGGGGTCGCTACCGCCACGGTGTACGCCGCCTGTCGATCGGCCGGCATCACCCGGTCGCTCGACGAGATCACGGCCGTCTCGCGGATCGAGCGCACCCCGGTCGGGCGCACCTACCGGTATCTGGCGCGGGAGCTCGGCCTCGAACTCGAACCGGTCGACCCTGCGGAGTTCGTCCCGTGA
PROTEIN sequence
Length: 265
MRSSIPARSDARTRARTRERDQDYDPDHSHDRESEDREQSQKPSRELSLERPASCPECESATVERSTGGELACGKCGLVVAENEIDRGPEWRAYDSAERRRKSRVGAPATRRLHDEGLTTAIDPRDRDAAGRALPERRREQVARLRQWHERIRTSEPSERTLQFGLGEIDRMASALGLPRSIREVASVLFRRALADDLVRGRSIEGVATATVYAACRSAGITRSLDEITAVSRIERTPVGRTYRYLARELGLELEPVDPAEFVP*