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sw_7_scaffold_356_11

Organism: SW_7_Halobacteriales_65_23

near complete RP 34 / 55 MC: 5 BSCG 29 / 51 MC: 4 ASCG 35 / 38 MC: 2
Location: comp(10387..10899)

Top 3 Functional Annotations

Value Algorithm Source
TATA-box binding protein (TBP), component of TFIID and TFIIIB n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSB4_HALBP similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 170.0
  • Bit_score: 170
  • Evalue 2.10e-39
tata-box binding protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 170.0
  • Bit_score: 170
  • Evalue 5.80e-40
TATA-box binding protein (TBP), component of TFIID and TFIIIB {ECO:0000313|EMBL:ADQ66903.1}; Transcription factor {ECO:0000313|EMBL:ELY30410.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 170.0
  • Bit_score: 170
  • Evalue 2.90e-39

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Taxonomy

Halogeometricum borinquense → Halogeometricum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 513
ATGGGGAGCGGTAGCTTAGGACGTGAGTTGGATTTGAACGTTCTCGTGAACGAGATAAGAGCGGAGGTGAGTGATTCGCTTGAGGTCAACTTCACTAGCGACGGTATCGTCACACTTCGTCTAAACGAGGATAGTCCTGCTTTCACCGTGTATCGCACAGGTACATTTCAAATCCGAGGGGCGGACTCTAAGGATGCCCTTGAGAAAGCAGAGTCCACGTTCCGTGAGGTTTTAAAGAGAATCGATGTGGATGTTCCATCGTACGATTTTAGCCATGTCACTTCGGTTTTCGTCGGTGATCTTGAACAGACGGTTAATCTGTCCGCGGTGTCCATTTTGCTTGGCTTGGAGTCCACAGAGTACGAGCCCGAACAGTTCCCTGGGCTGATTTATCGTCCATCAGAGTCCCCATTTATTCTCCTCATTTTTGCGTCTGGTAAGGTTGTCATCACGGGTGGAACGAGCAAGCGTCGTGCTGAAAAGGAGCTGGATTCCTTACAAAACCGGCTATAG
PROTEIN sequence
Length: 171
MGSGSLGRELDLNVLVNEIRAEVSDSLEVNFTSDGIVTLRLNEDSPAFTVYRTGTFQIRGADSKDALEKAESTFREVLKRIDVDVPSYDFSHVTSVFVGDLEQTVNLSAVSILLGLESTEYEPEQFPGLIYRPSESPFILLIFASGKVVITGGTSKRRAEKELDSLQNRL*