ggKbase home page

sw_7_scaffold_4287_19

Organism: SW_7_Halosimplex_carlsbadense_67_16

partial RP 17 / 55 MC: 1 BSCG 11 / 51 ASCG 9 / 38
Location: comp(16872..17081)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=797114 species="Ar similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 69.0
  • Bit_score: 118
  • Evalue 5.30e-24
2'-5' RNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D661_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 69.0
  • Bit_score: 118
  • Evalue 3.80e-24
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 69.0
  • Bit_score: 109
  • Evalue 4.90e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 210
ATGGGCTTCGACCCCCAGGACCACGAGTTCACGCCCCACGCGACGGTCGCCCGGATGGACCACGCCGGCGGGAAAGAACTCGTCCAGCGCCGCGTCCGCGAGGACGACCCCGACCTGGGTTCGGTCTCTGTCGAGGAGGTCCGCCTCAAAGAGAGCGCCCTCGGGGGCGACGGCCCGACCTACTCGACGCTCGAACGGTTCCCGCTGTGA
PROTEIN sequence
Length: 70
MGFDPQDHEFTPHATVARMDHAGGKELVQRRVREDDPDLGSVSVEEVRLKESALGGDGPTYSTLERFPL*