ggKbase home page

sw_7_scaffold_1673_1

Organism: SW_7_Viridiplantae_56_9

partial RP 32 / 55 MC: 8 BSCG 16 / 51 MC: 4 ASCG 13 / 38 MC: 3
Location: comp(3..2399)

Top 3 Functional Annotations

Value Algorithm Source
Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SAG5_PHYPA similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 814.0
  • Bit_score: 573
  • Evalue 3.80e-160
hypothetical protein; K03252 translation initiation factor 3 subunit C similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 814.0
  • Bit_score: 573
  • Evalue 1.20e-160
Eukaryotic translation initiation factor 3 subunit C {ECO:0000256|HAMAP-Rule:MF_03002}; Short=eIF3c {ECO:0000256|HAMAP-Rule:MF_03002};; Eukaryotic translation initiation factor 3 subunit 8 {ECO:000025 similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 814.0
  • Bit_score: 573
  • Evalue 5.30e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Physcomitrella patens → Physcomitrella → Funariales → Funariidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 2397
GTGTGTGCGGGCAGATACTTGGTTGATGAGGACTCGGATGAAGACGATGAGGGCGAGCGCCGCGAGGTGCTATCAAAAAAGAATAAGCGCCTTGAAGAGGTCCGCACTATGCTCTCCGAGATCCGAAGCAAGATGAGCTCCGACGAGTGGACCGAGTTGCACTCGCTCTTCAACCGCCTCACGAAAGCAGCTGATTCCGCTTCCAAGTCGCTCGATGGGAGATTTCCCCGGTTGTACTTCAAAGCGCTCGCTGAGCTTGAGGATGGTGCCCAGTCTCGAGGAAAGGACGATGCGAAAGGGAGCATGACCGCCGACAACTTCCGCTCGCTTAGCACCATGAAGCAGAAGATGAAGAAACACAATCGTCTGTACGAGGAACAGGTGAAAGACGCACGTGAGAAGTCGGACAACAGCCTCGAGTCTGCTGACGCGCAGGAGGGCGATACGGCTGATTTGTCACCGCAAGAGCCGGAGGAGAAACTGCAAGCGCAGCAGAAGCAGCAGCAACAGCGGTTGCAGCGACCAAAGGCAGAGCGGCAGCGCGACCAGGTGATGTCGCTCTCGCAGGATGATGTCAGCGCCGAGACAGTGGACAAGAGGCTACGTGAAACACTGCTTGCACGTGGCCGTAAGGGCACAGACCGGCAGGAGATGGTCGAGCGCCTTGGGCACCTTGTCACGCTATCGAGATCGCCGCCGCAGCGCGCCGAGGTACTCATGCACGTCGTCTCCGCGCAGTTCGACATCAGCCCCTCCATAGCCTCGCACATGCCTGTTGAAACCTTTAAGAAGTGCGCGCTTAATGTCTACCGCCTGCTTGAGCTGCTGCATGAGCACCGCAATGTGAAGCTCGTTGAGCCCTCGGCTGAATACTATCAGCAGCAGCAGCAACAGCAGCAGTATGAGAATGGCGACGCAGCTGGTGCAGGAGCAGTTGCAGTGGATCAGGAGCCGCGGAAGATGTGGCTTGACGGGTACGACAGGAGCAAGACGTACGAGGTGTACGGCAATGTCATTTCATACGTCGAGCGATTGGACGACGAACACTTCAAGACATTGCAGTGCACTGAGCCGCACTCTCCCGAGTTTGTTGAGTGCATGCGCGACGAGCTGCCTTTACTTCAGCTCATGAGTGACACCGCCGAATATGCCGCACGTGTGGGTGATTACGTCGGCCATGCACGACTTGCCCAGCGTCAGATTGAGCACCTGTACTTCAAGCCCGAGCATGCGTACGAGTCAATGATCTCGCTAAGTGAGGAGCGACAGCGTGAGATGAAGGATAGCGAGTCTGCAAGCGTTGACACGACCGTCGCCAATGGCCTCTACATCCCAGCAAAGCTAAGTCACCCATGGAAGCATAACAGCTGTACCGAGGCGCTGCACAGTCTTTCTGCTACCGTCTTTGAGCGGACTAGCGAGAGCACCAATCGGCGATTGCGCGCCCGCACGATGCTTGCGTTGTGTTATCACGCAGCGCTCAGGGGTGACTACAGAACTGCGCGTGAGACCATGATGGTATCACATGTGCAGGAGGATGTGAGCTCGATGGACGTGAGCACCATGGTGCTCTTCAACCGCGCGATGGCGCAGCTTGGCGTGGCGGCATGTGCCTCTGGGCTTTTTTCCGACGCTGCGTCCTGCCTTGCAGAGCTGCACGCGTCGTCGCGCATCCGTGAACTGCTTGCGCAAGGTAGCCCACCGCAGCGGTACCAGGACCGCACTGCCGAGCAGGAGCGTGAGGAGCGAAAGCGCCAGATGCCATTTCACATGCACATCAACCTGGATCTGCTTGAGTGCGTGCATTTGACAAGCGCGATGCTGGTGGAGGTTGCAGGGATGGCTGCAAACGCTGTCGACTTTGTGCACGGCAGGAGCACGAACCGTATGTTTCAGCGGCAGTTGGACTTGTACGAAAAACAAACATTCTTGGGCCCACCGGAGAGCGCGCGTGATCACATCATGGCGTCGACCCTTGCGCTCCTTAGAGGCGACTGGGAGCGCGCGTCCTCACTCATACGATCGCTGTCTGTTTGGGATCTGTTACCGGTCAGCAGTAAGGAGGATATGCTGCAGATAATGGACGAGCGCATAAAGAGAGAGAGCTTGAAGGCGTACTTGCTTTCGCAATGCGCGCACTACCGCTCGTTGTCGCTTTCAACGCTGGCAGAGTCGTTCGAGTTGGAGCAGGATGCAGTGTATGCAACTGTCTCGCGGATGATTGTGGGCAATGAGCTGCACGCAACGCTGGACCAGCCGTCGGAGGCGCTGGTGCTAGAGCATGTGAAGCCATCGAGGCTGCAATCCCTGTCGGTTGCATACGCTGACAAGCTGGGTGTATTGGTGGAGCAGAACGAGAAAGCAGCGGACATCAAGACCGGTGGTTCGGAGTTCAGC
PROTEIN sequence
Length: 799
VCAGRYLVDEDSDEDDEGERREVLSKKNKRLEEVRTMLSEIRSKMSSDEWTELHSLFNRLTKAADSASKSLDGRFPRLYFKALAELEDGAQSRGKDDAKGSMTADNFRSLSTMKQKMKKHNRLYEEQVKDAREKSDNSLESADAQEGDTADLSPQEPEEKLQAQQKQQQQRLQRPKAERQRDQVMSLSQDDVSAETVDKRLRETLLARGRKGTDRQEMVERLGHLVTLSRSPPQRAEVLMHVVSAQFDISPSIASHMPVETFKKCALNVYRLLELLHEHRNVKLVEPSAEYYQQQQQQQQYENGDAAGAGAVAVDQEPRKMWLDGYDRSKTYEVYGNVISYVERLDDEHFKTLQCTEPHSPEFVECMRDELPLLQLMSDTAEYAARVGDYVGHARLAQRQIEHLYFKPEHAYESMISLSEERQREMKDSESASVDTTVANGLYIPAKLSHPWKHNSCTEALHSLSATVFERTSESTNRRLRARTMLALCYHAALRGDYRTARETMMVSHVQEDVSSMDVSTMVLFNRAMAQLGVAACASGLFSDAASCLAELHASSRIRELLAQGSPPQRYQDRTAEQEREERKRQMPFHMHINLDLLECVHLTSAMLVEVAGMAANAVDFVHGRSTNRMFQRQLDLYEKQTFLGPPESARDHIMASTLALLRGDWERASSLIRSLSVWDLLPVSSKEDMLQIMDERIKRESLKAYLLSQCAHYRSLSLSTLAESFELEQDAVYATVSRMIVGNELHATLDQPSEALVLEHVKPSRLQSLSVAYADKLGVLVEQNEKAADIKTGGSEFS