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sw_7_scaffold_6247_2

Organism: SW_7_Viridiplantae_56_9

partial RP 32 / 55 MC: 8 BSCG 16 / 51 MC: 4 ASCG 13 / 38 MC: 3
Location: comp(3913..4527)

Top 3 Functional Annotations

Value Algorithm Source
Photosystem I subunit II, chloroplast n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1N6J0_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 138.0
  • Bit_score: 153
  • Evalue 1.80e-34
Photosystem I subunit II {ECO:0000313|EMBL:JAC69812.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" source="Tetr similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 143.0
  • Bit_score: 156
  • Evalue 4.00e-35
photosystem I protein PsaD similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 67.0
  • Bit_score: 107
  • Evalue 4.30e-21

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 615
ATGGTTGGATTAGGAAGACTCGCTCGAGTTTTGGTTCAGCAAGTGATGCATGGAAGACGTTATCATAAAGCCATATCTGGAGAGCGAGTTCAGGGCGGGGAAGAAGCGGCAATGGCGCAGACTGCGGTGGCAAGCGGTGCTAGGGCCAGCGGGCAGGCACTGGCCAGGAGGGAGCAGAAGGGGCGAAATGGATGCGCAGGCAAGCGCGGCGCAGTGACGCCGATGGCGCAGGAGCAGGCGGCGCCAGAGGAGAAGTCTGAGAAAAAGGAGAAGAAGGAGTGGACACCCCCACCCCTTGACCCAAACACGCCCACGCCCATCTTTGGTGGCAGCACGGGCGGCCTCCTCCGGAAGGCACAGACAGAAGAGTTCTACGTCATCACCTGGGCATCCAAGAAGGAGCAGCTCTTCGAGATGCCCACTGGCGGCTCTGCCATCATGCGCGAGGGAAACAACCTCCTCAAGCTCGCGCGCAAGGAGCAGTGCCTCGCCCTCCTCGCCCAGGTTCGCTCTCTCAACACTCAACGCTCTTCTTTTTTACTCTGCTTTCATAGCCAGTGCTTTGATCCCATTCCTCTGCTGTTTGGAGCAGCTTCGCAGCAAGTACAAAATTGA
PROTEIN sequence
Length: 205
MVGLGRLARVLVQQVMHGRRYHKAISGERVQGGEEAAMAQTAVASGARASGQALARREQKGRNGCAGKRGAVTPMAQEQAAPEEKSEKKEKKEWTPPPLDPNTPTPIFGGSTGGLLRKAQTEEFYVITWASKKEQLFEMPTGGSAIMREGNNLLKLARKEQCLALLAQVRSLNTQRSSFLLCFHSQCFDPIPLLFGAASQQVQN*