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sw_8_scaffold_1075_8

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: 6023..6886

Top 3 Functional Annotations

Value Algorithm Source
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 70.0
  • Bit_score: 80
  • Evalue 7.80e-13
Uncharacterized protein n=1 Tax=Latimeria chalumnae RepID=H3B0X8_LATCH similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 203.0
  • Bit_score: 221
  • Evalue 1.30e-54
DNA-directed RNA polymerases I, II, and III subunit RPABC1 {ECO:0000313|EMBL:ACO51617.1}; TaxID=8400 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anu similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 203.0
  • Bit_score: 221
  • Evalue 1.80e-54

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Taxonomy

Rana catesbeiana → Rana → Anura → Amphibia → Chordata → Metazoa

Sequences

DNA sequence
Length: 864
ATGGAGGATGACGTCTGCAGCGGCGCGGAGGCGGGGGCGGCACGCGCAGGAGCAAAAGCGCAGGGGCTGGAGAGGAATGCCGGGAAGCGTGGCGCCGACAGAGACCGCGGGAAGCTCCGCATTGCGTGCGGAAGAATGGCGACAGCAATGAGCGAGGGCGCGCGGCTGTGGAGGGTGAGGAAGACACTGCTGGAGATGCTCAGAGACAGGAACTACATTGTGAGAGAATCGGACCTGAACATGACACTGGAGGAGTTCCAGCAGCTCTTTGGGGAGGTGCCCCGTCGAGACGAGCTCGAGGTGTTTGCAACACACTCCGGCAATGAAGATGACTCCATCATCGCCTTCTTTCCCGATGAGAAACCCGGCGTGAAGACGCTCAACAACTACGTGCAGAAGATGCGCGATGTGGAGGCCAGCCGCGCCATCCTCGTTCTCTCGCAGCCTCTCACCGCCCAAGCACGCAACAGTCTCTCTGAAGTCAATCAGAAATACCCCATGGAGCAATTTGTCGAGCAAGACCTGCTCGTCAATATCACCAAGCACCAGCTCGTACCCCAGCACGTTGTTCTCTCCGAAGACGAGAAGCGCGAGCTCCTCCGCCGCTACAAGGTGTACGAATCGCAGCTCCCTCGCATCCAAACCAACGACCCCGTCGCCCGTTACTACGGCTTGCGCCGCGGCAATGTCGTCCGCATTCTTCGCCCTTCCGAAACCGCCGGAAAGTACGTCACTTATCGTTGTTGCACCGCGTCTCTGCCAGCAACACACCGCGCAGACAGCTTACAAGGTCGCAACCACGACGGGAGCTCTTTGAAACTCAAGAATGAGCGATCACAGAGGACCAAGACCTCTGGCTTCTAA
PROTEIN sequence
Length: 288
MEDDVCSGAEAGAARAGAKAQGLERNAGKRGADRDRGKLRIACGRMATAMSEGARLWRVRKTLLEMLRDRNYIVRESDLNMTLEEFQQLFGEVPRRDELEVFATHSGNEDDSIIAFFPDEKPGVKTLNNYVQKMRDVEASRAILVLSQPLTAQARNSLSEVNQKYPMEQFVEQDLLVNITKHQLVPQHVVLSEDEKRELLRRYKVYESQLPRIQTNDPVARYYGLRRGNVVRILRPSETAGKYVTYRCCTASLPATHRADSLQGRNHDGSSLKLKNERSQRTKTSGF*