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sw_8_scaffold_12220_1

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(1..1326)

Top 3 Functional Annotations

Value Algorithm Source
IS4 family transposase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NHR4_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 413.0
  • Bit_score: 468
  • Evalue 5.60e-129
IS4 family transposase {ECO:0000313|EMBL:EMA56200.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 413.0
  • Bit_score: 468
  • Evalue 7.80e-129
IS4-like transposase similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 446.0
  • Bit_score: 297
  • Evalue 6.30e-78

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Taxonomy

Halococcus thailandensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1326
AACGACCTCCTCGACTGGGATCCTGCCCAGTGTACGGTCTCACCGGGCCATCGCCTCCTCGCCATCGCCGCGAACTTCCTCACCGAAGGCGCTGCTCTCGTCCACCTCGAGGAGTTCTACGCCCAAACGGATACGGAGACCCTCTTCGGTGAGGGCATCGAACCGAGCCACCTCAACGACGATGCGCTTGCCCGTGGCCTGGAGAAGTTCGTCGAGGCCGGCTGTCGACGCGTGACCGAGAGTGTCCTGCTCGAAGCCGCCACCCGAGAAGGCATCGACACCGGCATCCTGCACGGGGATACCACCTCGTTTTCCGTCCACGGGGAGTACGATTCCGAGGACTACACCGACGACGCCGCGGTCACGCTCACCTACGGCCACAGCAAGGACAACCGGCCGGATCTCAAGCAGTTCAATATCGGTCTCGGCGTCAATCGCGACGGTGTCCCCGTCGTCGGGGACATCCTCGATGGGAATCGCTCTGATATGAGCTGGAACACCGAACTGGTGAGGCGACTTCGGAACACCCTCGAAACGGACGAACCCCTGGTCTACGTCGGCGATAGCAAAGTCGTCCGTGAGGAAACGTTCGAAGCGGCCGCTGCCCAGGAGATCGACCTGCTCACCCGCTTGCCGAAGACCTTCAATCTGACAGATGCGGTGATTGAGGACGCGATCGACGCGGCCGATTGGATCGATGTCGGGACGTTGTCCGACCGCGAGGACGCCACGCACTACCGCGTTCAGCGCCGTCCGGGGACGCTCTACGACCAGCCCGTCAGCTGTGTCGTCGTGCAGTCGTCCTCGAAGGCGGAGACCGCCGAGGAACGGGTCTCCGCCACGGTGGCGTCAGCTGAAGCATCGCTGGAATCGGCGCTTGAGGCCGTCGAGGACCGCACCTTCGCGTGTGAACCGGATGCCCAGTCAGCCCTCGAAACATGGCGAGAGGAGCACGCCGATCCGTTTTTCGACGTGACGGCTGACATCATCGAAACCGAACGGAAGAAATCGCGAGACGGCCCCGGCCGGCCGCCGAAGGACTGGGACCCCTACGAGACGGTCTACACGATCGAGGGCTCCATTGAGCGGAACGAGGCGGCGATCAGCCGGCGGAAAGCGATCGAGAGCTGCTTCGTGGTGGTGACGACGATCCAAGACACCGAGGCGTGGCCAGCGACGCGCGTGTTGGAGGAGTACAAGCACCAGCACACGGTCGAACGGCGGTTCCCGCTGCTGAAGGATCCGAAACTGGTGGGGCCGATTTACGCCAAACGGGACGAACAGGTCGAAGCGCTGGGCTACGTGCTGCTCCTGGCGTTATTGATC
PROTEIN sequence
Length: 442
NDLLDWDPAQCTVSPGHRLLAIAANFLTEGAALVHLEEFYAQTDTETLFGEGIEPSHLNDDALARGLEKFVEAGCRRVTESVLLEAATREGIDTGILHGDTTSFSVHGEYDSEDYTDDAAVTLTYGHSKDNRPDLKQFNIGLGVNRDGVPVVGDILDGNRSDMSWNTELVRRLRNTLETDEPLVYVGDSKVVREETFEAAAAQEIDLLTRLPKTFNLTDAVIEDAIDAADWIDVGTLSDREDATHYRVQRRPGTLYDQPVSCVVVQSSSKAETAEERVSATVASAEASLESALEAVEDRTFACEPDAQSALETWREEHADPFFDVTADIIETERKKSRDGPGRPPKDWDPYETVYTIEGSIERNEAAISRRKAIESCFVVVTTIQDTEAWPATRVLEEYKHQHTVERRFPLLKDPKLVGPIYAKRDEQVEALGYVLLLALLI