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sw_8_scaffold_1300_13

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(8796..10262)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrial similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 500.0
  • Bit_score: 350
  • Evalue 3.40e-93
tRNA-splicing ligase RtcB n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T208_NATMM similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 500.0
  • Bit_score: 350
  • Evalue 2.40e-93
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 500.0
  • Bit_score: 350
  • Evalue 6.90e-94

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Taxonomy

Natrialba magadii → Natrialba → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1467
ATGTCAGATGTACCGACCCCTCGTATTGAAGGCGATTATACCGAGGCTCTAGTATTTTTACCTGAAGAAGAAATTGAAGACTCCGCATATGAGCAAATTCAAAGTATGGTCAATCACCCTGCATTTCGAAATCCTGTTCGAATACAAAGTGATTGTCACTATTCCCCCTCCTGTATTGTGGGATTCACAATGCCTCTTAGTAACCGGGTTAGTCCCTCAGTTGTCTCTTATGATATAGGGTGTGGTTTACTATCTGTTAAATTAGAGAATTATGGTTTTGACCCAACTAATGAAGAAGACCTTCTCGAAATTGATGAAATTGTTCGTGATACTATTCCAATGGGGCGCTCAGTAAATAATGGTGCTGTTTATCACATGAAGAATGATTTTCCGTGGGACGAATTCGCTCATAAATGGGAGACATTTGCTACAAATCACCTTGACGATGATATTGAACTTGAAAAGTACCATCCAGATGAATTTAACCCAGATATTGAGTACTTCAAGAAACTCTGTCAAAAAGTACGTTATGACCTGAATCGCTCGATATCCGGAGTCTCAAGCCTTGGCTCCGGGAATCATTTTATCGAGTTTGGTCTTGATAGTGATGAAGAATTGTGGGTGACTATTCACTCTGGGAGTCGTGGTATGGGTAGAGCTATTGCTGAGTACCATGAAGAGCGTGGCGAGCGCCTTCTGAATATTCAGGAAGCTCGTGATGCACTTCGAGACCTCCCTGAAGAATACTTGAAATATGTTAAGTTTGACCTTGAAGATGTAAGCGATAACAATCTTCTTAAGTGGCTGCAGGGTAGTATGGGCGAGTCATTTGTTGACTACGAGGCGCTGAAAAACGAGTATGCTGGTACCGATGAAGCAGGAAAGATTGAAGAGATTGGAGACAACCTTAAGACTGCGATTCCTGACCACAACAGTGAACAGGATGACCCTGCCTATCTTGAGGGGGAGGAGGCGGTTGAGTATTATGTTGACCTTGCATTTGGGCAGACATATGCGAGTGAGAACCGGAAAGCTATGGCTCGGTCAATTGCGGAAGCGTTAGATGCTAATATTGTTGAAGAAATTGAGTCAGTGCATAATTATATTGATTATGAGGATGGTATTATTCGGAAGGGTGCTACACCTGCTCGTGAGGGACAGGATGTGATTATTCCAATGAATATGGCTGATGGAACATTTCTTGCCCGTGGCAAAGGCAACGAAGAGTGGAATCAGTCGGTTGCGCATGGTGCTGGTCGTGTGATGAGTCGGACGCAGGCGTTTGAAGAGCTAAATAAGAAAAAACACGCTGAAATGATGGGGGAGACAGTTGCAACAGAGCTACCCACAGATGAGCACCCACAATCATATAAGCAGACTGATTTGATTCTTTCATTAATTGATGGGTCTACAGTTGATATAAAGGACCATCTGGAACCCATTCTTAATTTAAAGGCCCCTGAGTGA
PROTEIN sequence
Length: 489
MSDVPTPRIEGDYTEALVFLPEEEIEDSAYEQIQSMVNHPAFRNPVRIQSDCHYSPSCIVGFTMPLSNRVSPSVVSYDIGCGLLSVKLENYGFDPTNEEDLLEIDEIVRDTIPMGRSVNNGAVYHMKNDFPWDEFAHKWETFATNHLDDDIELEKYHPDEFNPDIEYFKKLCQKVRYDLNRSISGVSSLGSGNHFIEFGLDSDEELWVTIHSGSRGMGRAIAEYHEERGERLLNIQEARDALRDLPEEYLKYVKFDLEDVSDNNLLKWLQGSMGESFVDYEALKNEYAGTDEAGKIEEIGDNLKTAIPDHNSEQDDPAYLEGEEAVEYYVDLAFGQTYASENRKAMARSIAEALDANIVEEIESVHNYIDYEDGIIRKGATPAREGQDVIIPMNMADGTFLARGKGNEEWNQSVAHGAGRVMSRTQAFEELNKKKHAEMMGETVATELPTDEHPQSYKQTDLILSLIDGSTVDIKDHLEPILNLKAPE*