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sw_8_scaffold_1312_8

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(11335..11895)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG02_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 186.0
  • Bit_score: 157
  • Evalue 1.50e-35
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 186.0
  • Bit_score: 157
  • Evalue 4.30e-36
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY49491.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 186.0
  • Bit_score: 157
  • Evalue 2.10e-35

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Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGAAAGAGCAAGAGCGCGACTGGGTTGAGCGCACGCGTGCAGGAGACGAGGAAGCGTTTCGGGAGATGTTTCAGGCGTACTTCCCGAAACTATGCGGGTTTGCTGCAGACTACATCGATTCTGTGGATCGGGCCCGAGACCTCGTGCAGGACGTATTCCTGAAGATCTGGGATCGCCGGGAGGATTGGACAGTGCGCACCTCCCTGCGCTCATACCTCTATCAGGCCGTCAAAAACCGGGCGCTGAACGAAATTCGTCGGACGACTTCTGAGCAGGAAGCGGAAGATTTTCTTGAGTACACCGAGCCGACGTCAGACTCACGGACAGCAGCGGACACCTTTCACATGGAGGCCCTATCGGAGAACATTGAATCGGCCATTTCCCAACTCCCTGATCGTCGACGGCGTGCCTTTCTCCTGCACCGCCGTCATGGGTTTACGTACAAAGAAATCGCCCAGATCATGGACATCTCTCCGAAGACCGTAGAGAATCACATCGGCCGGGCGCTCAAGTCTCTCCGGAAGCAGCTTGCGGACCAGTTCCCCCGCGAACTGGAGTAG
PROTEIN sequence
Length: 187
MKEQERDWVERTRAGDEEAFREMFQAYFPKLCGFAADYIDSVDRARDLVQDVFLKIWDRREDWTVRTSLRSYLYQAVKNRALNEIRRTTSEQEAEDFLEYTEPTSDSRTAADTFHMEALSENIESAISQLPDRRRRAFLLHRRHGFTYKEIAQIMDISPKTVENHIGRALKSLRKQLADQFPRELE*