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sw_8_scaffold_1601_13

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: 5987..7732

Top 3 Functional Annotations

Value Algorithm Source
cshA; DEAD-box ATP-dependent RNA helicase CshA (EC:3.6.4.13) similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 282.0
  • Bit_score: 222
  • Evalue 4.40e-55
DEAD/DEAH box helicase n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1FFF0_MICSR similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 392.0
  • Bit_score: 540
  • Evalue 2.60e-150
DEAD/DEAH box helicase {ECO:0000313|EMBL:ACO69358.1}; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Micr similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 392.0
  • Bit_score: 540
  • Evalue 3.60e-150

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Taxonomy

Micromonas sp. RCC299 → Micromonas → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1746
GTGGTGCATTGCACTGCAGGCGCCATGGGCTTTGATCCCTACTCTCAGCAGGGCACCTCGCCTCAGCAGATGCCCCCGCACATGCACCAGCAGATGTACCACCCACAGTATCCCCAGAATTTCCCGTATGCGATGGACGACCGCTTCGCCCCGCCTCCTCAGCAGCAGCATTATGACGGTTACAAGCAATTCCAACAACCACCACCGCCCATGGCTAGTGGAAGTAATCACTTCTACTACCAGCAGCAGCCACTGCCTCAGCAGCAGCAGCAGCAGCAGGGTTATCTTTACGGCGGAGCTGACGCCAATGGCCGGCCGCTTGAAGCTGGGTTCAAGCAGCCGTACGATCAGGGTTACTTCCAAATGCCACAGCAGAAAGAGCGAGTCCAGGGCGCCGGCGAGAGCACATCGCAGCAAAACATGCCACCGCACTTGCAACAGCAAGCGCTGCAACGGCCGCAAGATCCGCCACAGCAGCGGCCTCCACCGGGTGACCATTTCTATCAGGCGCAGCAGCCGCCAACACAACAAGGACAGTACTCACCGCAGTACGAACAACCGTTTGCAAAAGACGGAGGCAGGAATGCTACCACGGATGCGGACGGCTACATGCAGCAGCAACAGCAACAGCATTCACAACAACAGCCACAGCAGCAGGAGGGAGAAAGCCAGGCAAAGAACGAGGCTGACATGCCTCCGAGAGATGAGCGGTACATGACGGAGGACGTAACGAGCACGAAGGGCACAGAATTTGACGACTACTTCTTGAAGCGCGAGCTATTGCGTGGAATATATGAAAAAGGCTTCGAGCGTCCTTCGCCGGTTCAGGAGGAGTCAATCCCTATCGCACTCACTGGACGCGACATTCTAGCTAGAGCAAAAAACGGCACTGGCAAGACGGCTGCATTCACTATTCCCGTGCTTGAGCGCATGGACACGTCGCAAAACACAGTGCAATCTCTCTTGCTCATCCCAACCAGAGAGCTCGCGCTGCAGACAGCGCAAGTGTGCAAAGAACTTGGGAACCACCTGAACGTGCAAGTGATGTCCAGCACTGGTGGAACGTCGTTGAAAGACGACATTATGCGATTGCATCAAACTGTGCACATTCTAGTTGCCACGCCAGGGCGTGTTCTTGACTTAGCACGCAAGGAGGTGTTGAAGCTGAACAAATGTAATGTTCTTGTAATGGACGAGGCAGATAAGCTGCTATCGCCCGAATTTCAAGAGCTTGTTGAGCAGGTAATCGGCTTCCTGCCAAAACGGCGGCAAATACTCATGTACTCAGCCACTTTCCCAGTCACAGTAAAGGACTTCAAGGACCGCTTCTTGCAGAAGCCGTACGTGATCAACCTCATGGAGGAGCTCACACTCAAAGGCATTACCCAATATTACGCGTTTGTTGAGGAGCGGCAGAAGGTACACTGCTTGAACACGCTTTTCAGCAAGCTTCAAATCAACCAATCTATCATCTTCTGCAACTCCACCAATCGAGTGGAGCTGCTCGCCAAGAAGATCACTGAGCTCGGCTATTCGTGCTTTTACATCCATGCTAAGATGATCCAGTCCCACCGCAACAGAGTGTTTCACGGTATGCTCGTCTCCTGGTCTCACACTCATTGTCACGTCGCCACCTCATGTGATCCTCACTTTTGCATATGTCTGCTTCAGACTTCCGGAATGGCTCGTGTCGAAACTTGGTGTCGTCGGACCTCTTTACACGTGGGATCGACATACAGTCTGTGA
PROTEIN sequence
Length: 582
VVHCTAGAMGFDPYSQQGTSPQQMPPHMHQQMYHPQYPQNFPYAMDDRFAPPPQQQHYDGYKQFQQPPPPMASGSNHFYYQQQPLPQQQQQQQGYLYGGADANGRPLEAGFKQPYDQGYFQMPQQKERVQGAGESTSQQNMPPHLQQQALQRPQDPPQQRPPPGDHFYQAQQPPTQQGQYSPQYEQPFAKDGGRNATTDADGYMQQQQQQHSQQQPQQQEGESQAKNEADMPPRDERYMTEDVTSTKGTEFDDYFLKRELLRGIYEKGFERPSPVQEESIPIALTGRDILARAKNGTGKTAAFTIPVLERMDTSQNTVQSLLLIPTRELALQTAQVCKELGNHLNVQVMSSTGGTSLKDDIMRLHQTVHILVATPGRVLDLARKEVLKLNKCNVLVMDEADKLLSPEFQELVEQVIGFLPKRRQILMYSATFPVTVKDFKDRFLQKPYVINLMEELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYIHAKMIQSHRNRVFHGMLVSWSHTHCHVATSCDPHFCICLLQTSGMARVETWCRRTSLHVGSTYSL*