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sw_8_scaffold_1812_20

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: 11267..12166

Top 3 Functional Annotations

Value Algorithm Source
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_03162}; EC=2.1.1.205 {ECO:0000256|HAMAP-Rule:MF_03162};; 2'-O-ribose RNA methyltransferase TRM7 homolog {EC similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 210.0
  • Bit_score: 189
  • Evalue 8.10e-45
23S rRNA Um-2552 2'-O-methyltransferase (EC:2.1.1.166) similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 90.0
  • Bit_score: 74
  • Evalue 4.50e-11
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T5I3_PHYPA similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 210.0
  • Bit_score: 189
  • Evalue 5.80e-45

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Taxonomy

Physcomitrella patens → Physcomitrella → Funariales → Funariidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 900
GTGCTCGTTCGGCCTTTAAGCTCCTGCAGCTCGACGCGTTCTTCAACGTCCTCGCCTCTTGTCGTGCCGTGGTTGACCTCTGCGCTGCGCCTGGATCCTGGAGCCAAGTGCTCTCCCGCACAATTAACGCCAAGCACAATGACGGCAACGATGGTTGCCCGCCCGTGGTGGCAATCGACCTGCAGCCTATGGCACCTCTCCCGGGTGTGGCTCAGGTGCAGGGCGACATCACCTCCAAGCCCACCATCGATGATGCTNNNNNNNNNNNGCGCCGATGCTGTCCTTAGCGACGGCGCACCCGACGTGACTGGCCTACACGACCTTGATGAGTACATCCAGTCCCAGCTCGTGCTCTCCGCCCTCGCTGTCTGCGCCCGCGTTCTTAATCCGGGCGGCACCTTCGTTGCCAAGGTCTTCCGCGGGCGCGACATCAGCCTTCTCTATACCCAGCTCCGCATCCTCTTTCCCGAGGTGTACTGCGCCAAGCCTCGAGCTTCCCGCAACTCCTCCGTCGAGGCCTACCTCGTCTGCCGCAACTTCTCTCCCCCCCCATCCCCAAGCATCGAGCATCTCCAGTACGAGCTTGAGCGCATCTCTCTCGCGCATGCTGACACTGAAGCTCACGGCCCACCTGCTTCGAGCGAATCCTCAAGCGAGCTCGTTCAATTTATTGCGTGTGGTGACCTTTCCGGCCTCGATAGCGACATGAGCTATTCACTCGAAACTGATCTTACGGATGAGATGTCCACTTTCGCGCCTGGGCGGAACGATATGCCGCAAGATAAGGATGGAGTAGATCAGCCAAACGCTCATACACCGCTCATACCAGTACAACCGCCGTTGCAACCGCCGTACAAGCATGCAATCCAGCTGAGAAGGCAAGGAACTGACGCTGGCTGA
PROTEIN sequence
Length: 300
VLVRPLSSCSSTRSSTSSPLVVPWLTSALRLDPGAKCSPAQLTPSTMTATMVARPWWQSTCSLWHLSRVWLRCRATSPPSPPSMMXXXXXADAVLSDGAPDVTGLHDLDEYIQSQLVLSALAVCARVLNPGGTFVAKVFRGRDISLLYTQLRILFPEVYCAKPRASRNSSVEAYLVCRNFSPPPSPSIEHLQYELERISLAHADTEAHGPPASSESSSELVQFIACGDLSGLDSDMSYSLETDLTDEMSTFAPGRNDMPQDKDGVDQPNAHTPLIPVQPPLQPPYKHAIQLRRQGTDAG*