ggKbase home page

sw_8_scaffold_201_11

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: 8722..11979

Top 3 Functional Annotations

Value Algorithm Source
Learning/memory process protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2TZN0_SALR5 similarity UNIREF
DB: UNIREF100
  • Identity: 32.5
  • Coverage: 305.0
  • Bit_score: 180
  • Evalue 9.70e-42
Learning/memory process protein {ECO:0000313|EMBL:EGD79054.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-02 similarity UNIPROT
DB: UniProtKB
  • Identity: 32.5
  • Coverage: 305.0
  • Bit_score: 180
  • Evalue 1.40e-41
putative PAS/PAC sensor protein similarity KEGG
DB: KEGG
  • Identity: 25.8
  • Coverage: 341.0
  • Bit_score: 102
  • Evalue 5.60e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salpingoeca rosetta → Salpingoeca → Choanoflagellida → Eukaryota

Sequences

DNA sequence
Length: 3258
ATGGGGGGAGGGGAGAAGGGGAGGAGCAGATCGGGCTCGCCGTCGGACGAGATCTTCACCGTGACGCCATCTCGTTCCTGCGGTTGTGCGGGGCCACCCCGACCGCAGGCGCTGACGGTGGGCATATCAACAGGATCTGTTGCCTTCAACGGAAAGCTTCTTGGCTATGTCCTTGGCGCATATGTAATGCCGCGACACGCGGGCGATACCCACCCCGCGATCGAGATCGCGATGACTCAGCCCGCCCGCCTTTCGCGATCCTTCCGCCGTCAATTCTATGCGGACCCACCCGGATCCTCCTTCGCACTCCTGGGCTCACTCCGTCGCGCCGCGGATTCTGATCACCGCAAGCTACCCTCCGCACATTTGAGCGCCCCCAACGTGAGCTCTCGCTTTTCCTCTGGTCGTAGCTTTGACGCCAGCTATAAACCCCTTGCGCCCTCGTCGCTTCGTCGCTGGTGGGGCAACGCTGTTCGTGTGGACGCTTGTGGGGATGCACTTGGCTTAAGCTCCGGATTCTGCTCGCACCATTTTGGCTCCCTCCGTGAGTCCCTTCTTCCGCAAACCAGCCGCTATGGAGGTCAGGATACCCATTCGTACTCCGAGAAAGACAAACGTCTTGCCTCTCTAATTGATGTCCTTGAAGCTGTATCACAACAGATTGTTCGCGCCGACGAACAGGCGACACTCGCACCTCTGCTTGCCGCGCTGCGTAACGCATGCAGCGAACTACTGAGCGCCGACTTAGCGTCCCTTTTTCTTAAATTTGAAGATCGTGGCTCCCAATATCTCTGGACTGTGCTTGACAACGGCCGCGAGGTGACTCTCTCTGTCAACGAAGGCCTCGCTGGCGCGTGTGCTCGGTCAAAGGAAACTATCTTCGTTGAGGATGCCTACGACGACAGCCGCTTTAACCACCGTGTCGACAGCGCTACCGGCTACCGGACGCGTGGCGTCATGTGCGTTCCCGTCATGGGCAGCAGCAACGACGAGCTCCTCGGCGTGCTGCAGGTGGTGAACAAGCGCTCGCATTCTGCACTCTCCCCGAACATCTCCTCCGTCAGAGAACAAACCGAATCCGACGCCAATGCCGACGCATCTTACACCCAAGCTAGTGGGTTTGGAGAAACGGACGAAAGGGTGCTCAAAGGCTTCGCATTTCTTGCTACCGTCGCTATTAGCTCCGCTCAGCAGCTTCAGGCCGAGCGTGAAGCTAAGGCTCGATATGACAGCCTCTCGCGGCTGAGCCGGCACTTATTGTCAAATCTCGACCTGCGCGCCATCCAAGCAGTAGTGAGAAAAGAGGGGCCTCAGCTCGTCGCAGCCGACAGAGCACACCTGTTGCTGCTTGATGCGCAAGGTGGCGTGCTCTGGACACAGGTCGGAGAGCATCCGGCGGTGCTACCTCTATGGACCGACGAGCCGAACCCGGTGCATGCATCGCTTCTCGCGAGCGTTGTGATTGAGGAGCAGAGGCAAGTAATCCAGGACGCCGCCCGAGATCCTTCACTTGTGTACGACGAGTCGATCCGCCTTGGCTTGCGCTCCACTACCGGCGTACTGCGCAGCATTGGGGATTCGCAGGAGCAAATAACCACAACTTGTGACGACACCTCCATCAATACATCGACTCAGAGTGGACAGCGAACGCCTAGCGGACCAAAGGGTAGCATCGAAGTCACTCCTCCCCCCACCATTGCCGTACCTGAGTCATCAATACAATCTGAGCTGAATAGCAAGACCACCGCCGACGATTGGCAAGGCTCTGGTCAGACCGAGCCGCACGCAGTCCTTGCGTGTCCGATGATGAATACGCGCGGTCGTGGCGCAGTGGGCGTGATGCTCGCGACTCGAGATCATTCAAACGCTATGGCCTTCGACGAGGAGGACATCGAGCTCTTCGAGGCGCTTGCGCGGTACACAGCGTCCGCGGTGTCAAACGCGGCAGCTTTTGCCTCCACCTCAAGTTTGCCCCGGCCGCGGAGCACCAGCTCTGAAGAGTACTTATATGGCTATGGCAGCACGGCGAGATCGGCCCGCTCTGCCGAGGTTGCATCAGCTTCGCCTTTGTCTCTTGCAGTGCCTCGAACCGGGAAGTACTGGACGAACCCGTGCGCTAATGTGCATCCAAGCGAGCCGCGCTGCAACTGCGACTCAAGCAGCGTGGAGGAGGAGTTGCTGGCTGAGCTGGATGAGTGCCCCGATGAGCGTGTATTGCACAGGAAGTTGGGAGATGAGGCTGTGTCTTGGGACTTTAACCCGCTTGACAGGGTCTGGATGGACCAGCAGCTCAAGGATCTGAGCATTGAGATCATTCGGTCGTGGGACTTGGAGCGCGTTTTCATGATGCCAAGCAACACGCTCGAATCTTTCGTGAGCGAAATGGCTTCTCGGTACAAGTCGAACCAATTCCACAACTTTGCGCACGCTGTGTCAGTGCTGCAGGCGTCGCACATGATGCTGAAGCAGCTGGACGCAGCGAGCAGGCGCAAGTTCTCACGCACGGATGCTCTTGCCCTGCTTCTTGCAGCAATTGCTCACGACGTCGGCCATCCAGGAACAACAAACTACTTCCAGACGAACAGCCTGTCGCCATTAGCCATCAAGTATAACGACACCTCTGTGCTTGAGCACCACCACTGCTCACTTGCATTCGAGCTCCTGTTGAAGCGCGAGTGCAACATGCTCGCGGCAGTGCCGCGAAGCATCTTCACGCGAGTGCGACGAACAATTTGCACCATGATTCTTGGTACTGACCTGGCGTGCCACGACAAACAATTGATGCAGCTGAGCACGAACGTGACGTCGGCGGAGGCGCTATGTAAATCGGACGCGGAAAAGGACATACTGCTGTCGTCTATTCTACACGCTGCAGACCTTTCCAATCCGTTGCGCCCGTTTGAGGTGTCACAACGGTGGGCAAAGCTACTAGCAGCGGAGTTCATGGAGCAGGCGAAGTTGGAGCACGAGCTGGGCTTACCGACCACGAAGTTCATGGAGAATGGTTTCTCATTAAACAACGAGATCTTCTTCGTGAGCGGCTTCTGCCTGCCATTCTGGGACGCGCTGGCATGCGCTTTGCCGGGGCTGAAGCACGCGTCGAGTAGAGTGCATGAGACGCTGGAAAGGCTGCGACAAGCAGCAGCATACGTGGAAGAGCAGCAAAAGGCTGCACCGAGCGAGGCAGCAGCTCAGGAGAGTGCAAGCCACGAGCAAAATCCGGAAGCTTTACAGGCAAGGCAAGACGAACAGAGGTGA
PROTEIN sequence
Length: 1086
MGGGEKGRSRSGSPSDEIFTVTPSRSCGCAGPPRPQALTVGISTGSVAFNGKLLGYVLGAYVMPRHAGDTHPAIEIAMTQPARLSRSFRRQFYADPPGSSFALLGSLRRAADSDHRKLPSAHLSAPNVSSRFSSGRSFDASYKPLAPSSLRRWWGNAVRVDACGDALGLSSGFCSHHFGSLRESLLPQTSRYGGQDTHSYSEKDKRLASLIDVLEAVSQQIVRADEQATLAPLLAALRNACSELLSADLASLFLKFEDRGSQYLWTVLDNGREVTLSVNEGLAGACARSKETIFVEDAYDDSRFNHRVDSATGYRTRGVMCVPVMGSSNDELLGVLQVVNKRSHSALSPNISSVREQTESDANADASYTQASGFGETDERVLKGFAFLATVAISSAQQLQAEREAKARYDSLSRLSRHLLSNLDLRAIQAVVRKEGPQLVAADRAHLLLLDAQGGVLWTQVGEHPAVLPLWTDEPNPVHASLLASVVIEEQRQVIQDAARDPSLVYDESIRLGLRSTTGVLRSIGDSQEQITTTCDDTSINTSTQSGQRTPSGPKGSIEVTPPPTIAVPESSIQSELNSKTTADDWQGSGQTEPHAVLACPMMNTRGRGAVGVMLATRDHSNAMAFDEEDIELFEALARYTASAVSNAAAFASTSSLPRPRSTSSEEYLYGYGSTARSARSAEVASASPLSLAVPRTGKYWTNPCANVHPSEPRCNCDSSSVEEELLAELDECPDERVLHRKLGDEAVSWDFNPLDRVWMDQQLKDLSIEIIRSWDLERVFMMPSNTLESFVSEMASRYKSNQFHNFAHAVSVLQASHMMLKQLDAASRRKFSRTDALALLLAAIAHDVGHPGTTNYFQTNSLSPLAIKYNDTSVLEHHHCSLAFELLLKRECNMLAAVPRSIFTRVRRTICTMILGTDLACHDKQLMQLSTNVTSAEALCKSDAEKDILLSSILHAADLSNPLRPFEVSQRWAKLLAAEFMEQAKLEHELGLPTTKFMENGFSLNNEIFFVSGFCLPFWDALACALPGLKHASSRVHETLERLRQAAAYVEEQQKAAPSEAAAQESASHEQNPEALQARQDEQR*