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sw_8_scaffold_2145_19

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(9955..10665)

Top 3 Functional Annotations

Value Algorithm Source
Isoform 2 of Transcription initiation factor TFIID subunit 14b n=1 Tax=Arabidopsis thaliana RepID=Q9FH40-2 similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 150.0
  • Bit_score: 125
  • Evalue 6.20e-26
Coffea canephora DH200=94 genomic scaffold, scaffold_1 {ECO:0000313|EMBL:CDO96974.1}; TaxID=49390 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophy similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 142.0
  • Bit_score: 130
  • Evalue 2.70e-27
GAS41; YEATS family protein; K11341 YEATS domain-containing protein 4 similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 150.0
  • Bit_score: 125
  • Evalue 1.90e-26

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Taxonomy

Coffea canephora → Coffea → Gentianales → asterids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 711
AGGAGCATGGCGGAAGCGCGAGCGGAGGGGGAGGTGGCCTTACCAATCCAGTACGGAACAATTGCATGGCAGAGGGAGAAAGTGGCGGACCAGACGGCAACGCACGGGTGGCTCGCTTTCGTCAGAGGGGCTGAGAACCAGGACATCAGTCACACAGTGCAGTCGGTGCAATTCGATCTGCACCAGTCGTTCAGTCAGCCGCAGATGATCATCACGAGCCCGCCATTCGAGATATCGAACACCGGCTGGGGTGAGTTTGACATGTGCATCACGATCCATTTCCATCAAGACGTCCACGAATCCCCGCTCCAATTCCTCCACTTCCTCAAGCTGTACCACGACGAGAGCGTCTCTGACAGTGGGAAAGCCAGCCTCCCTGTGATCCGCATCGTCTCCGACGATGTCGTCTTCCACAAACCCTGGTTCGCTCCCTCTGTGATGCTCAACGCCTGGAATAATCTATTTCTTACCATGAAGGTGATCGTGGTGAAACGCAGGCTGTCGTTCAAACAGAGATTCAAACAAATCACACCCACAACTCTTCCCCCAACGCAGGTTGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGAGCAGCTGAGGAAACGAGCCGAATCAAAGCAATGTACGACGAGTGGCTTGGCATTGCAGCATCGTGAGTATCGAATATCTGATGGAACCATACATTCAAGCTGA
PROTEIN sequence
Length: 237
RSMAEARAEGEVALPIQYGTIAWQREKVADQTATHGWLAFVRGAENQDISHTVQSVQFDLHQSFSQPQMIITSPPFEISNTGWGEFDMCITIHFHQDVHESPLQFLHFLKLYHDESVSDSGKASLPVIRIVSDDVVFHKPWFAPSVMLNAWNNLFLTMKVIVVKRRLSFKQRFKQITPTTLPPTQVDXXXXXXXXXXXXXXHEQLRKRAESKQCTTSGLALQHREYRISDGTIHSS*