ggKbase home page

sw_8_scaffold_26112_2

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(574..1362)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein Csc2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NGA8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 242.0
  • Bit_score: 432
  • Evalue 2.60e-118
CRISPR-associated protein Csc2 {ECO:0000313|EMBL:EMA56573.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 242.0
  • Bit_score: 432
  • Evalue 3.70e-118
CRISPR-associated protein Csc2 similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 245.0
  • Bit_score: 400
  • Evalue 3.10e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus thailandensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 789
TTCCGCAACTCCAATCACGACCGTGCGGAGACACAGAAGTTCGGTGACAAACTCCACGCCCAAGTGAACGGCGAGAAGTTCACCAGCAAGGAGCGTCTCACCGGTCTCGACCTGCTCCGACGACTGGACGATGAACTCGACGACCACCTCGTTCACGAGGGCTACGCGTACAACGAGCCGACCGATCTCGAGGGGTCACTAAACGTCGGGACGCTCACGTACGGGCTCGCCGGGACGGGCGATCAGGACTTCGCAATCAAATCCCGCGTCGTTGAGGGTTACACATACACGACCGATGAGTACGACCTGATGAACAAGGAGACCCGAAACGCCGTCTACGAGTCGGGAACGATGCGAACAGAGGAAGGTGAGCAATCCGAAGCATTATTCGACTTCGTGAAAGTCCAGCCCGGCAACAACCTCATACATTTCATCACGCTCGAAGCGGCGACGCCAGAAATGCTGCTGTACGTCCTCCACAACATCCTAAACACGGGGAAGTACGGCGCACGCGAGACGCGAACCGGCCGAAACGTCCGCAACAGCGTGATCGGTGTCGTACTCGGTGACCACGACACGTCACTCTCGACCGGCGAACTCCTCATGAAGTACCACGACCCCGAGGACGACGAGGCCGACCTCCGGAATGATATCGGGACGTATATCGAGGAGGTTCGGCGCTCGGATTGGGAAGTGTACGGCGAGATAGACGGTGCGGACGCCTTTGTTGCGAGAGGAATTCGCGTCACTAACCGAGGAGGCACAAGACACCTTCGGCGTCGCCGATGA
PROTEIN sequence
Length: 263
FRNSNHDRAETQKFGDKLHAQVNGEKFTSKERLTGLDLLRRLDDELDDHLVHEGYAYNEPTDLEGSLNVGTLTYGLAGTGDQDFAIKSRVVEGYTYTTDEYDLMNKETRNAVYESGTMRTEEGEQSEALFDFVKVQPGNNLIHFITLEAATPEMLLYVLHNILNTGKYGARETRTGRNVRNSVIGVVLGDHDTSLSTGELLMKYHDPEDDEADLRNDIGTYIEEVRRSDWEVYGEIDGADAFVARGIRVTNRGGTRHLRRRR*