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sw_8_scaffold_2764_7

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(4170..5987)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Amborella trichopoda RepID=U5D9E3_AMBTC similarity UNIREF
DB: UNIREF100
  • Identity: 27.7
  • Coverage: 509.0
  • Bit_score: 184
  • Evalue 3.80e-43
Transcription initiation factor TFIIH subunit 1 {ECO:0000313|EMBL:JAC64764.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetr similarity UNIPROT
DB: UniProtKB
  • Identity: 28.1
  • Coverage: 601.0
  • Bit_score: 187
  • Evalue 6.20e-44
Os08g0338200; Kelch related domain containing protein. similarity KEGG
DB: KEGG
  • Identity: 27.9
  • Coverage: 517.0
  • Bit_score: 178
  • Evalue 5.00e-42

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1818
ATGTACAGGGTGCAGCGCCAACTGAGCAGAAGCGAATGGGAACCCGGCAGCCTCTCTCTTCTTACCACGGGCACTAACGATCCCCCCCGGGTGGAGCTCCAACCCGATAAGCCTGAGGGCACGCAGCCAGTTCAGTTGCCATTAAACACCATCACTAGCCACCAGCAGTCGAAGAAGCGCCGTTGGAACCTCCGCCTTGTCGGTGGTTCCCCTTCAATCGCCCTTGTGCTTGCCTTCGCCGATGAGCAGTCAAAGCAGGCCTTCAGTGAAGAGCTCCAGCTCGCTCTTTCTTCTTCCTCGCTCTCACAATCATCCAACACCTCCTCCGACGCTGCCGCCCGATCTGCCCTCCTCAAGAGTGACCCCTCCCTCCAGCGCGTGCACGCGCAGCTCGTTGAATCCGGTGCTGTCTCCGAGGACGAGTTCTGGTCCGAGCGTCAGCACATGCTTGAGCAAGCCCATGGCCGCGCCAAAGGCTCCAGCTGTGATCAGCCCCGTGAGAAGCACCAGCGTACTGGCATAGTTTCCTCGATGGAACACATCTCCCATGAGTCCCACGATATGACCCGCAGCTTCCGCCTCACCAAGCAGCAGATGCAGCAAATCTTCACTGAGCAACCCGCCGTACGAAGGGCGTACCTCGATAACGTCCCCGCCACGATGACCGAGCAGGACTTCTGGTCTTACTACTTCCAAGCCGAAACGCTCCGTCAGGTTCGACGCCACACCGGCCCGCTCAACCAGAAGGAGCAGAAAGTGCTTGACATGTTCGCCGACAACAACCAGCTTCGCAAGCAGGCCATGACCCGCCGCATGAACCGTGTCGACCCCTCTGTGAATCTCGCCCTCAACCAGCATGACCAGCTCCTGCCCGGCTACGGCACCGCGCATGCCGGTCACAAGGACGAGTGGAGCTGCGAAGGTGCCTTCTTTAGCCAGGGCAAAGCTGTGGGCGATGTGATCCGCAACGTGAACACCCACGGCGAAGCTGCGCTCGATGGCCCACCTGCCAACGACCGTTTCGACTCCGCCGCTGCTGCGAAAGACGCCGAGCGCCGTGTGCAACAAGAAGCCAACATGCCCGAGTCAGAGCAGGTGGAGGCGCTCGGGCGACATTACAAGGAGCTCGAGCGGGAGCTGCACATTGATGAGCTCGGTTGGGAAGGTGGATTGAATGAGCCGAAGAGTGATCATAGCCAGGCGTCTGAATCCACCATCAACGTGACAAACCCGCGCCTCTACTTTGTGAAGTCGCGTGAGCAACAAGACGATACCAATGGGCAACAACGACAGAACAAACGTGCGCGAACCTTCTCAGCTGAAGAAATCGAGTGCCAAGTGCGAAGCGCCCAGGATGGCTATGCCCAGAGCGCACTTGATTCTGACGGAGCGCTGACCGCGCTGAGCGAGCTCTCAAGGGAGGCGAGCGGGACTCGTCCAACAGACAGCATGGATATGGCCGGAAGAGCTGAACCGCTTTCATTCGAAACTCGCAGGTTGCTACAATGCGAGCAGCAAACTGTGCATGAGCTGCTGCGGCATTTTTGGAAGTCAGTGCCCGCTACCACGCCATCAAAGCGGGACAAGCTTGAGAAGCTAATGAGTACTGCGCAGCAGTGTCGGCAGCGCATTGAGGAGACGAAGGCGTCCTTGCAGCCTGCGCAACGCCACTCGGCCTCGGTCGCTACACGGCCATTGCTTCAAGCGATTGATGCAGCATTTGAGCAGCTCGACAGAGAGTGTTTTATCAGTGAAGCAGATGGCTCTGGTGAGGCAAACGGCGCTTCGATGGAACAAGCAGCAGGAGTGGTGACGTGA
PROTEIN sequence
Length: 606
MYRVQRQLSRSEWEPGSLSLLTTGTNDPPRVELQPDKPEGTQPVQLPLNTITSHQQSKKRRWNLRLVGGSPSIALVLAFADEQSKQAFSEELQLALSSSSLSQSSNTSSDAAARSALLKSDPSLQRVHAQLVESGAVSEDEFWSERQHMLEQAHGRAKGSSCDQPREKHQRTGIVSSMEHISHESHDMTRSFRLTKQQMQQIFTEQPAVRRAYLDNVPATMTEQDFWSYYFQAETLRQVRRHTGPLNQKEQKVLDMFADNNQLRKQAMTRRMNRVDPSVNLALNQHDQLLPGYGTAHAGHKDEWSCEGAFFSQGKAVGDVIRNVNTHGEAALDGPPANDRFDSAAAAKDAERRVQQEANMPESEQVEALGRHYKELERELHIDELGWEGGLNEPKSDHSQASESTINVTNPRLYFVKSREQQDDTNGQQRQNKRARTFSAEEIECQVRSAQDGYAQSALDSDGALTALSELSREASGTRPTDSMDMAGRAEPLSFETRRLLQCEQQTVHELLRHFWKSVPATTPSKRDKLEKLMSTAQQCRQRIEETKASLQPAQRHSASVATRPLLQAIDAAFEQLDRECFISEADGSGEANGASMEQAAGVVT*