ggKbase home page

sw_8_scaffold_339_9

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(4627..5598)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like n=1 Tax=Cucumis sativus RepID=UPI0002B47E1C similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 335.0
  • Bit_score: 217
  • Evalue 2.10e-53
Uncharacterized protein {ECO:0000313|EMBL:KDP32115.1}; TaxID=180498 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae similarity UNIPROT
DB: UniProtKB
  • Identity: 39.3
  • Coverage: 351.0
  • Bit_score: 226
  • Evalue 6.50e-56
ATP-dependent RNA helicase SrmB similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 192.0
  • Bit_score: 96
  • Evalue 2.00e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Jatropha curcas → Jatropha → Malpighiales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 972
ATGCTGCATGTACTCGCCCTCATCAAACTCGGCAGCATCAAGCGCAAAAGCCTCATCTTCACAAGCAGCGCACATTCATGCGTGCGATTGAAGCTCTTCCTGGAGCGCTTTGGCGTGCACTGCGCCTCCGTGCACGGCGAACAACCACGCAACAGCCGTGACAATACCTTAGCACAGTTCAACAAAGGGCTCTTCGATCACCTGATAGCGGCTGAAAGTGGGCGTGGCGATGCTGAGTTCGGTGTTGCTCGCGGAATCGATTTCAAAGGTGTTCGAACTGTCATCTGTGTTGGCATCCCGGAGTCGGCCGAGCAGTACGTGCACAGAGCCGGCCGCACTGGACGAGCTGGAAGGAAAGGCACATCACTTGTTGTTGCGCCTGTGGAGAAGCATGAGGAGCTTGACGCAGTCGAGCTCAAGCTTAAGCAGCGTCTCGGCGACGACTTTGCGCTCAAGCCCTACCCAAAGCTGAACAGAAAAACAGTCGAGAGCATGCGCTACCGAGCAGACGATGTCCTACGCTCGCTTGGAAAGAACACAGTCCGTGAGGCACGTTTGCGCGAGCTGCGAATAGAGCTCATTAACAGCAAGAAGCTTGAGGAACACCTTGCATCGAATCCCGACGACAAAAGCTTGCTTAAACATGATCGCATGCTTGCAAAAAGCAAGCCACCCAAGCATCTTGCGCACGTGCCGGACTACATCAAGCCGGCCGAGAAGAAGCAGCGAAAGAGCAACATCAAGCAAAAGGCAAGCGGGGGAGGGAGGGTGCAAGGCAAACGTAAACGCAAGCGAGGCGAGCACTGGGAAGCAGCGGCTGACCCTTTGTTGACACGACAGACAAATTCTGACGGCAACGATGCGCAAAGGAAAGAGAAGAGTGGCCCAACTGAACAGAAGCGCAGTGCAGCTGTGTCGCATTCCGGTGGACGAGGAGGGAATGTACATGCGCACGAGAGGAAGAAAGCTTGA
PROTEIN sequence
Length: 324
MLHVLALIKLGSIKRKSLIFTSSAHSCVRLKLFLERFGVHCASVHGEQPRNSRDNTLAQFNKGLFDHLIAAESGRGDAEFGVARGIDFKGVRTVICVGIPESAEQYVHRAGRTGRAGRKGTSLVVAPVEKHEELDAVELKLKQRLGDDFALKPYPKLNRKTVESMRYRADDVLRSLGKNTVREARLRELRIELINSKKLEEHLASNPDDKSLLKHDRMLAKSKPPKHLAHVPDYIKPAEKKQRKSNIKQKASGGGRVQGKRKRKRGEHWEAAADPLLTRQTNSDGNDAQRKEKSGPTEQKRSAAVSHSGGRGGNVHAHERKKA*