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sw_8_scaffold_3972_1

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(187..1068)

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor Tfb4 n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0Z6M2_9CHLO similarity UNIREF
DB: UNIREF100
  • Identity: 36.1
  • Coverage: 299.0
  • Bit_score: 176
  • Evalue 2.90e-41
Transcription factor Tfb4 {ECO:0000313|EMBL:EIE26291.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-1 similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 299.0
  • Bit_score: 176
  • Evalue 4.10e-41
hypothetical protein; K03143 transcription initiation factor TFIIH subunit 3 similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 292.0
  • Bit_score: 173
  • Evalue 1.00e-40

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Taxonomy

Coccomyxa subellipsoidea → Coccomyxa → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 882
GTGAATTCTCTTTCCCTTTCCATGGGCGACGCTTCCCTCCAGGTGGTGCTTGTTGAGGCCTCTGCTGCTCTCTGGGCTCGCCCGCCCGGCGGTATGTGCGCCCGCGGCCTTGGCGAACTTTGTCACACGCTTTCCTCCTTCCTCGAAGCCCATCTCGCCCTCCATCGTCGCAACGCCGCCGCGATCTTTGCCTACAGCCCCTCCGAATCGTCCCTCATCCTGGACACCCGCCGACACTCCAAATCCACTCTCGAAGCCCTCCTTTCATTACTCCCTCCCATCCTCCAGCGCGACTCCTCCTCCTTCCCCGACGAGCCTACACCCCTAAGCGGTGTCCTCTCCCAGGCTCTCTGCGCCTGCAGCCGCGAGCTCGACTGTAGTTCTGACTCTCTTTCCGGCAGCGGTGATCCTTCACATCAGAACGCCTTCTCCACGGATGGTTCCTCCAGCACCGCTCGCAGGCCGCGAGTGCTCTGCGTCTCTGGCAGCTCCGACCCCACCGAGCAGTATGTTCCGATCATGAACTGCCTATTCTCTGCCCAGCGCCTCGGTGCGCGCATCGACACCCTCCGAATCGGCACCAGCGACAGCCCTTTCTTGCAGCAGGCTGCACATCTCACCGGCGCCGCGTACGTTAAGCCTTGCCGACCTGAGAATGTTTTGCAGCACATGCTCGCGCGCTTCGCACCGGACGAGGTGTCAGGCTCCCTCCTCTGTAGGGTGCCGCCCCCAGCTGTTGATTTCCGTGCTTCATGCTTTTGCCACCAAAAGCCAGTGGACATCGGCCGCGTATGTAGCGCATGCCTCTCCATCTTCTGCGAGGATGTGGACAGGTGCTCCACGTGTGGCGTTAACTTCTCCAATTCCAGTGCCCTGACTTAG
PROTEIN sequence
Length: 294
VNSLSLSMGDASLQVVLVEASAALWARPPGGMCARGLGELCHTLSSFLEAHLALHRRNAAAIFAYSPSESSLILDTRRHSKSTLEALLSLLPPILQRDSSSFPDEPTPLSGVLSQALCACSRELDCSSDSLSGSGDPSHQNAFSTDGSSSTARRPRVLCVSGSSDPTEQYVPIMNCLFSAQRLGARIDTLRIGTSDSPFLQQAAHLTGAAYVKPCRPENVLQHMLARFAPDEVSGSLLCRVPPPAVDFRASCFCHQKPVDIGRVCSACLSIFCEDVDRCSTCGVNFSNSSALT*